RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 C6orf203Q9P0P8 240 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 SCHIP1Q9P0W5 487 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 ABCD2Q9UBJ2 740 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 TBC1D29Q9UFV1 150 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 BCAP29Q9UHQ4 241 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 PNMA8BQ9ULN7 279 aaPredicted RBP12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 DMTF1Q9Y222 760 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 DTNAQ9Y4J8 743 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 PCDHA9Q9Y5H5 950 aa12.24□□□□□ -0.45
TNFAIP3-209ENST00000619035 NPIPB8E9PQR5 432 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 STK25O00506 426 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 TXNDC9O14530 226 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 C8BP07358 591 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 MTHFD1P11586 935 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 PRPH2P23942 346 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 RHDQ02161 417 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 ACSM2AQ08AH3 577 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 E2F2Q14209 437 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 SPANXN4Q5MJ08 99 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 C10orf62Q5T681 223 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 ACSM2BQ68CK6 577 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 KIAA0895LQ68EN5 471 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 HID1Q8IV36 788 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 GALNT4Q8N4A0 578 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 SETD7Q8WTS6 366 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 EGLN2Q96KS0 407 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 PPM1MQ96MI6 270 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 MENTQ9BUN1 341 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 SPATA7Q9P0W8 599 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 TMED5Q9Y3A6 229 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 AP4S1Q9Y587 144 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 TRBV23OR9-2A0A075B6M9 112 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 PRR19A6NJB7 356 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 EML2O95834 649 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 ZCCHC18P0CG32 403 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 ERGP11308 486 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 PRPS2P11908 318 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 CD6P30203 668 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 ACTR1BP42025 376 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 SRP54P61011 504 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 ACTR1AP61163 376 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 ZP2Q05996 745 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 TRAP1Q12931 704 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 SELPLGQ14242 412 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 RBBP5Q15291 538 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 RPE65Q16518 533 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 CYP2A13Q16696 494 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 IRGCQ6NXR0 463 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 LPCAT2Q7L5N7 544 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 AMIGO2Q86SJ2 522 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 SYT12Q8IV01 421 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 C1orf52Q8N6N3 182 aaKnown RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 TMEM102Q8N9M5 508 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 LINC01555Q8NAE3 123 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 CANT1Q8WVQ1 401 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 JPH3Q8WXH2 748 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 SMPDL3AQ92484 453 aa12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 CUEDC1Q9NWM3 386 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP3-209ENST00000619035 TCRBV3S1A0A5B6 114 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 DYTNA2CJ06 578 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 PRAMEF26H0Y7S4 382 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 SAP18O00422 153 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 AKAP10O43572 662 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 TIPRLO75663 272 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 TGFB1P01137 390 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 GSK3BP49841 420 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 LIPEQ05469 1076 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 FZD5Q13467 585 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 ALG11Q2TAA5 492 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 PGS1Q32NB8 556 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 NANOGP8Q6NSW7 305 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 PRMT9Q6P2P2 845 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 DNAJC14Q6Y2X3 702 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 UBALD2Q8IYN6 164 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 GJD3Q8N144 294 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 DEFB119Q8N690 84 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 TMEM145Q8NBT3 493 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 OR52E1Q8NGJ3 308 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 SLC13A3Q8WWT9 602 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 WDR34Q96EX3 536 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 EHD1Q9H4M9 534 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 CLMPQ9H6B4 373 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 NANOGQ9H9S0 305 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 BRF2Q9HAW0 419 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 WSB2Q9NYS7 404 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 DLGAP2Q9P1A6 1054 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 PGRP06401 933 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 HSD3B1P14060 373 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 HSD3B2P26439 372 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 RAB28P51157 221 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 MTPNP58546 118 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 ZNF542PQ5EBM4 170 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 ADCK2Q7Z695 626 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 SLC22A18ASQ8N1D0 253 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 GLB1L3Q8NCI6 653 aaPredicted RBP12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 GATA6Q92908 595 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 METTL2AQ96IZ6 378 aaKnown RBP12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 PCED1AQ9H1Q7 454 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 PCDHGB4Q9UN71 923 aa12.22□□□□□ -0.45
TNFAIP3-209ENST00000619035 AURKCQ9UQB9 309 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms