RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CFAP206Q8IYR0 622 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 KIRREL3Q8IZU9 778 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 FAM71DQ8N9W8 422 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 ST6GALNAC3Q8NDV1 305 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 OR4E2Q8NGC2 313 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 NAT14Q8WUY8 206 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 TM9SF4Q92544 642 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 CDKN2AIPNLQ96HQ2 116 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 FER1L6-AS2Q96M78 137 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 OR52A5Q9H2C5 316 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 VCXQ9H320 206 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 ZNF552Q9H707 407 aaPredicted RBP8.23□□□□□ -1.09
GPC6-202ENST00000617456 XAB2Q9HCS7 855 aaKnown RBP8.23□□□□□ -1.09
GPC6-202ENST00000617456 FANCFQ9NPI8 374 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 GPN3Q9UHW5 284 aaPredicted RBP8.23□□□□□ -1.09
GPC6-202ENST00000617456 FKBPLQ9UIM3 349 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 SERTAD3Q9UJW9 196 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 TFR2Q9UP52 801 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 PTRH2Q9Y3E5 179 aaKnown RBP8.23□□□□□ -1.09
GPC6-202ENST00000617456 CSAG2Q9Y5P2 127 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 MYO7BQ6PIF6 2116 aa8.23□□□□□ -1.09
GPC6-202ENST00000617456 ADGRG4Q8IZF6 3080 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 A0A088AWK7 358 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 HEATR9A2RTY3 570 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 E7EQ34 232 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 CDK2AP1O14519 115 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 ZNF749O43361 778 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 BUD23O43709 281 aaKnown RBP8.22□□□□□ -1.09
GPC6-202ENST00000617456 SERPINB7O75635 380 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 IPO13O94829 963 aaKnown RBP8.22□□□□□ -1.09
GPC6-202ENST00000617456 FTH1P02794 183 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 POLBP06746 335 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 GSTA1P08263 222 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 SNRPB2P08579 225 aaKnown RBP8.22□□□□□ -1.09
GPC6-202ENST00000617456 HBQ1P09105 142 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 CBSLP0DN79 551 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 PVRP15151 417 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 ST6GAL1P15907 406 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 AGXTP21549 392 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 IL10P22301 178 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 ADRA1DP25100 572 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 ITGA3P26006 1051 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 MC4RP32245 332 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 CBSP35520 551 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 FOLR3P41439 243 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 HAAOP46952 286 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 SLC9A5Q14940 896 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 OASLQ15646 514 aaKnown RBP8.22□□□□□ -1.09
GPC6-202ENST00000617456 ZNF789Q5FWF6 425 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 DCAF10Q5QP82 559 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 METTL11BQ5VVY1 283 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 PLBD1Q6P4A8 553 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 Q6ZS92 163 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 FJX1Q86VR8 437 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 KCNMB4Q86W47 210 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 SPATA24Q86W54 205 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 SERPINA9Q86WD7 417 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 ANKRD53Q8N9V6 530 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 OR13C4Q8NGS5 318 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 BCAS4Q8TDM0 211 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.22□□□□□ -1.09
GPC6-202ENST00000617456 INTS12Q96CB8 462 aaKnown RBP8.22□□□□□ -1.09
GPC6-202ENST00000617456 CNDP1Q96KN2 507 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 BARD1Q99728 777 aaKnown RBP8.22□□□□□ -1.09
GPC6-202ENST00000617456 NRTNQ99748 197 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 C17orf62Q9BQA9 187 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 PITPNM3Q9BZ71 974 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 COG4Q9H9E3 785 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 ENAMQ9NRM1 1142 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 FAIMQ9NVQ4 179 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 SIRT5Q9NXA8 310 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 P4HTMQ9NXG6 502 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 OR6C2Q9NZP2 312 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 POMT2Q9UKY4 750 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 NOVA2Q9UNW9 492 aaKnown RBP8.22□□□□□ -1.09
GPC6-202ENST00000617456 DRG1Q9Y295 367 aaKnown RBP8.22□□□□□ -1.09
GPC6-202ENST00000617456 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.22□□□□□ -1.09
GPC6-202ENST00000617456 HIVEP1P15822 2718 aa8.22□□□□□ -1.09
GPC6-202ENST00000617456 CCDC88CQ9P219 2028 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 CFAP73A6NFT4 308 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 C2orf74A8MZ97 194 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 GOLGA8KD6RF30 607 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 GOLGA8TH3BQL2 631 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 E2F3O00716 465 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 LIASO43766 372 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 KLHL41O60662 606 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 ALOX12BO75342 701 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 KLF7O75840 302 aaPredicted RBP8.21□□□□□ -1.1
GPC6-202ENST00000617456 METTL18O95568 372 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 OR56A5P0C7T3 313 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 RAC2P15153 192 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 CALB2P22676 271 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 CCZ1BP86790 482 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 CCZ1P86791 482 aaPredicted RBP8.21□□□□□ -1.1
GPC6-202ENST00000617456 CDK16Q00536 496 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 BOP1Q14137 746 aaKnown RBP8.21□□□□□ -1.1
GPC6-202ENST00000617456 SSPNQ14714 243 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 PTPRCAPQ14761 206 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 CCNG2Q16589 344 aa8.21□□□□□ -1.1
GPC6-202ENST00000617456 CYP2A13Q16696 494 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms