RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 PRODHO43272 600 aa17.99■□□□□ 0.47
AC008878.3-201ENST00000617428 ITGB1P05556 798 aa17.99■□□□□ 0.47
AC008878.3-201ENST00000617428 CKMT2P17540 419 aa17.99■□□□□ 0.47
AC008878.3-201ENST00000617428 PPP3R1P63098 170 aa17.99■□□□□ 0.47
AC008878.3-201ENST00000617428 TTC9BQ8N6N2 239 aa17.99■□□□□ 0.47
AC008878.3-201ENST00000617428 DHRS7Q9Y394 339 aa17.99■□□□□ 0.47
AC008878.3-201ENST00000617428 A0A075B6Q4 140 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 SCDO00767 359 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 SHMT2P34897 504 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 GJA5P36382 358 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 MC1RQ01726 317 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 IL18Q14116 193 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TRPV1Q8NER1 839 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 MAPK15Q8TD08 544 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 CANT1Q8WVQ1 401 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 EBF2Q9HAK2 575 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 ADAMTS5Q9UNA0 930 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TRBC2A0A5B9 178 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TNFRSF10BO14763 440 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 SP140Q13342 867 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 LASP1Q14847 261 aaKnown RBP17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 PLEKHS1Q5SXH7 462 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TMEM130Q8N3G9 435 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 OR4K17Q8NGC6 315 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 OR2AJ1Q8NGZ0 328 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 OR5K1Q8NHB7 308 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 DIRAS2Q96HU8 199 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 MRGPRX2Q96LB1 330 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 FIZ1Q96SL8 496 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TRIM2Q9C040 744 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 ATXN10Q9UBB4 475 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 SLC7A8Q9UHI5 535 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 EI24O14681 340 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 COQ9O75208 318 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 RENP00797 406 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 CCT3P49368 545 aaKnown RBP17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 AGTR2P50052 363 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 DUOXA1Q1HG43 343 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 ZNF542PQ5EBM4 170 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TMEM25Q86YD3 366 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TMEM126BQ8IUX1 230 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 LRRC17Q8N6Y2 441 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TXNDC5Q8NBS9 432 aaKnown RBP17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 FAR1Q8WVX9 515 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 HIST1H2AAQ96QV6 131 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TPT1P8Q9HAU6 139 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 DIABLOQ9NR28 239 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 CA14Q9ULX7 337 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 TIMP1P01033 207 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 CTSAP10619 480 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 VLDLRP98155 873 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 LCN1P1Q5VSP4 162 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 C15orf39Q6ZRI6 1047 aa17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 MRM3Q9HC36 420 aaKnown RBP17.98■□□□□ 0.47
AC008878.3-201ENST00000617428 RNGTTO60942 597 aaKnown RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 LGI4Q8N135 537 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 ZSWIM3Q96MP5 696 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 TBX5Q99593 518 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 COPS4Q9BT78 406 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 PIAS3Q9Y6X2 628 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 DAPL1A0PJW8 107 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 AQP12BA6NM10 295 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 FAUP35544 74 aaKnown RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 SLC18A2Q05940 514 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 NDUFA5Q16718 116 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 AQP12AQ8IXF9 295 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 METTL27Q8N6F8 245 aaPredicted RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 RBCK1Q9BYM8 510 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 COMMD4Q9H0A8 199 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 RC3H2Q9HBD1 1191 aaKnown RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 KNL1Q8NG31 2342 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 IGLON5A6NGN9 336 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 CPNE3O75131 537 aaKnown RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 GLDCP23378 1020 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 CCINQ13939 588 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 PUM1Q14671 1186 aaKnown RBP eCLIP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 FAM214AQ32MH5 1076 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 LRRTM3Q86VH5 581 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 PLD6Q8N2A8 252 aaKnown RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 NECTIN4Q96NY8 510 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 NEUROD4Q9HD90 331 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 DLG5Q8TDM6 1919 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 PTPRZ1P23471 2315 aaPredicted RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 PRSS51A0A1B0GVH4 220 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 FAM240BA0A1B0GVZ2 78 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 MAFKO60675 156 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 XRCC1P18887 633 aaPredicted RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 SLC10A2Q12908 348 aaPredicted RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 HERC3Q15034 1050 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 DECR1Q16698 335 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 KIAA1161Q6NSJ0 714 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 APCDD1Q8J025 514 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 PHOSPHO1Q8TCT1 267 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 HAPLN2Q9GZV7 340 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 FBRSL1Q9HCM7 1045 aaKnown RBP17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 BRD7Q9NPI1 651 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 SDHAF3Q9NRP4 125 aa17.97■□□□□ 0.47
AC008878.3-201ENST00000617428 TRAPPC6AO75865 159 aa17.96■□□□□ 0.47
AC008878.3-201ENST00000617428 CYB5AP00167 134 aa17.96■□□□□ 0.47
AC008878.3-201ENST00000617428 GSRP00390 522 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms