RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 SCRN2Q96FV2 425 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 SERINC2Q96SA4 455 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 BAZ2AQ9UIF9 1905 aaKnown RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PLK4O00444 970 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 NIPSNAP2O75323 286 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 GATBO75879 557 aaKnown RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 MPSTP25325 297 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 GRIA3P42263 894 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ATP4BP51164 291 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZBTB6Q15916 424 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 DCAF12L1Q5VU92 463 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 REP15Q6BDI9 236 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 CCDC80Q76M96 950 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 ABHD12BQ7Z5M8 362 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 KBTBD8Q8NFY9 601 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 VANGL1Q8TAA9 524 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 PPP4R1LQ9P1A2 415 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 LAMB1P07942 1786 aa9.45□□□□□ -0.9
TNFRSF9-204ENST00000615230 RGS5O15539 181 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 MED26O95402 600 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TACSTD2P09758 323 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 CD70P32970 193 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TGFBR2P37173 567 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 CASP9P55211 416 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 SMU1Q2TAY7 513 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TIGD2Q4W5G0 525 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 KLHL12Q53G59 568 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 OTUD3Q5T2D3 398 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TMEM198Q66K66 360 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 B3GNT9Q6UX72 402 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 KRT77Q7Z794 578 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 MDGA1Q8NFP4 955 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 PMEPA1Q969W9 287 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 GPR22Q99680 433 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 MGME1Q9BQP7 344 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 HDHD2Q9H0R4 259 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ELL3Q9HB65 397 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 SCAMP1O15126 338 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 SHBGP04278 402 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 UQCRC2P22695 453 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ACVR2AP27037 513 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 OMPP47874 163 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF84P51523 738 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ARHGAP19Q14CB8 494 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TAB1Q15750 504 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF630Q2M218 657 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ALKBH2Q6NS38 261 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 MTERF3Q96E29 417 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 EBPLQ9BY08 206 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 IL21RQ9HBE5 538 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 REXO2Q9Y3B8 237 aaKnown RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 PIP5K1BO14986 540 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 UBOX5O94941 541 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 CDH1P12830 882 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 GJA4P35212 333 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 PLP2Q04941 152 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 DSG2Q14126 1118 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 PDZK1Q5T2W1 519 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ANKRD22Q5VYY1 191 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 NAIF1Q69YI7 327 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ARL9Q6T311 187 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ABRAXAS1Q6UWZ7 409 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZSCAN4Q8NAM6 433 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 RREB1Q92766 1687 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 A0A1W2PRG6 482 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 MAFKO60675 156 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 RCBTB2O95199 551 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 MT-ND5P03915 603 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 MMP2P08253 660 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 LEPRP48357 1165 aaKnown RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TAS2R39P59534 338 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 Q6ZVL8 140 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 KRT74Q7RTS7 529 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 PGAM4Q8N0Y7 254 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 FBXW8Q8N3Y1 598 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 SMPDL3BQ92485 455 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 POT1Q9NUX5 634 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 NENFQ9UMX5 172 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 A8MUA0 341 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 A8MUI8 341 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 EDF1O60869 148 aaKnown RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 FAUP35544 74 aaKnown RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 STK19P49842 368 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 RAPSNQ13702 412 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TMEM154Q6P9G4 183 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 CYP2R1Q6VVX0 501 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 SLC51AQ86UW1 340 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 RHEBL1Q8TAI7 183 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ZNF483Q8TF39 744 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ASB15Q8WXK1 588 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 OR5P2Q8WZ92 322 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TSACCQ96A04 125 aaPredicted RBP9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 RNF31Q96EP0 1072 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 ADAP2Q9NPF8 381 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 OXSMQ9NWU1 459 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TBX21Q9UL17 535 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 TMPRSS11EQ9UL52 423 aa9.44□□□□□ -0.9
TNFRSF9-204ENST00000615230 DOCK1Q14185 1865 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 A0A1W2PPC1 479 aa9.43□□□□□ -0.9
TNFRSF9-204ENST00000615230 CASKO14936 926 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms