RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 NXPE4Q6UWF7 544 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 VN1R5Q7Z5H4 357 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 MILR1Q7Z6M3 343 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 PIGWQ7Z7B1 504 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 FAM129CQ86XR2 697 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 PLD3Q8IV08 490 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 RAB42Q8N4Z0 105 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 ABHD11Q8NFV4 315 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 OR2L3Q8NG85 312 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 PIWIL2Q8TC59 973 aaKnown RBP7.72□□□□□ -1.17
PCDH9-205ENST00000614931 IFI44Q8TCB0 444 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 ZNF473Q8WTR7 871 aaKnown RBP7.72□□□□□ -1.17
PCDH9-205ENST00000614931 TWIST2Q8WVJ9 160 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 ATP6V1E2Q96A05 226 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 SH3KBP1Q96B97 665 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 PPP1R36Q96LQ0 422 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 C3orf30Q96M34 536 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 HBEGFQ99075 208 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 EBF4Q9BQW3 602 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 HAUS8Q9BT25 410 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 DPH7Q9BTV6 452 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 NUF2Q9BZD4 464 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 KLHL25Q9H0H3 589 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 ACTR8Q9H981 624 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 PELI2Q9HAT8 420 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 GEMIN8Q9NWZ8 242 aaKnown RBP7.72□□□□□ -1.17
PCDH9-205ENST00000614931 TMEM9Q9P0T7 183 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 LRIT1Q9P2V4 623 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 GIMAP2Q9UG22 337 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 DCTN4Q9UJW0 460 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 RALYQ9UKM9 306 aaKnown RBP7.72□□□□□ -1.17
PCDH9-205ENST00000614931 POMT2Q9UKY4 750 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 ZNF490Q9ULM2 529 aaPredicted RBP7.72□□□□□ -1.17
PCDH9-205ENST00000614931 TRAF6Q9Y4K3 522 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 PCDHB11Q9Y5F2 797 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 DNAJC15Q9Y5T4 150 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 SCN2AQ99250 2005 aa7.72□□□□□ -1.17
PCDH9-205ENST00000614931 IGF2RP11717 2491 aa7.71□□□□□ -1.17
PCDH9-205ENST00000614931 GOLGA8QA0A0J9YX86 632 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 FEZF1A0PJY2 475 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 CPED1A4D0V7 1026 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 GSAPA4D1B5 854 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 GOLGA8OA6NCC3 632 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 RHPN2P1A8MT19 583 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 GOLGA8NF8WBI6 632 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 H7BY64 318 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 HAT1O14929 419 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 CLGNO14967 610 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 KIF1CO43896 1103 aaKnown RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 KDM1AO60341 852 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 UBXN7O94888 489 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 TGDSO95455 350 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 CLDN9O95484 217 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 TBX6O95947 436 aaPredicted RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 FAM107AO95990 144 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 ENO1P06733 434 aaKnown RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 C1GALT1C1LP0DN25 315 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 UROSP10746 265 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 GLB1P16278 677 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 GNAZP19086 355 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 MAGP20916 626 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 HMOX2P30519 316 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 ARL1P40616 181 aaPredicted RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 GRIA3P42263 894 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 INHBCP55103 352 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 PRDX1Q06830 199 aaKnown RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 KIR2DS3Q14952 304 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 ABRAXAS2Q15018 415 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 TBCCQ15814 346 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 ZIC1Q15915 447 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 CPSF6Q16630 551 aaKnown RBP eCLIP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 TUBB8Q3ZCM7 444 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 XKR7Q5GH72 579 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 LIPJQ5W064 366 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 ZNF425Q6IV72 752 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 EFL1Q7Z2Z2 1120 aaKnown RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 TMPRSS9Q7Z410 1059 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 SPATA21Q7Z572 469 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 SPRED1Q7Z699 444 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 CPLX4Q7Z7G2 160 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 PAQR7Q86WK9 346 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 C17orf64Q86WR6 236 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 OOSP2Q86WS3 158 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 MYLK4Q86YV6 388 aaPredicted RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 CLYBLQ8N0X4 340 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 Q8N9G6 341 aaPredicted RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 AVL9Q8NBF6 648 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 OR4K1Q8NGD4 311 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 OR2T11Q8NH01 316 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 WDR20Q8TBZ3 569 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 USP7Q93009 1102 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 PTCD3Q96EY7 689 aaKnown RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 PRAP1Q96NZ9 151 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 DEPDC7Q96QD5 511 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 OR52B2Q96RD2 323 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 SLC38A3Q99624 504 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 TMEM120AQ9BXJ8 343 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.71□□□□□ -1.18
PCDH9-205ENST00000614931 SLC29A3Q9BZD2 475 aa7.71□□□□□ -1.18
PCDH9-205ENST00000614931 AICDAQ9GZX7 198 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms