RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 ATF4P18848 351 aaPredicted RBP11.43□□□□□ -0.58
CDH5-208ENST00000614547 PTNP21246 168 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 TUBA1BP68363 451 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 DUSP4Q13115 394 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 CHIT1Q13231 466 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 C10orf62Q5T681 223 aaPredicted RBP11.43□□□□□ -0.58
CDH5-208ENST00000614547 TUBA1AQ71U36 451 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 PRSS48Q7RTY5 328 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 AMIGO1Q86WK6 493 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 ZFP41Q8N8Y5 198 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 POF1BQ8WVV4 589 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 IPCEF1Q8WWN9 437 aaPredicted RBP11.43□□□□□ -0.58
CDH5-208ENST00000614547 PIK3R3Q92569 461 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 PARK7Q99497 189 aaKnown RBP11.43□□□□□ -0.58
CDH5-208ENST00000614547 FBXO44Q9H4M3 255 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 NKIRAS2Q9NYR9 191 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 SNX7Q9UNH6 387 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 SLC22A14Q9Y267 594 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 PCDHB5Q9Y5E4 795 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 STX16O14662 325 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 HAT1O14929 419 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 TSPAN9O75954 239 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 SLITRK5O94991 958 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 ZNF45Q02386 682 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 ABHD18Q0P651 414 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 SYTL3Q4VX76 610 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 LIPKQ5VXJ0 399 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 RRM2BQ7LG56 351 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 CYP4Z2PQ8N1L4 340 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 OR4A15Q8NGL6 344 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 ACBD6Q9BR61 282 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 CCM2Q9BSQ5 444 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 BEX1Q9HBH7 125 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 TM9SF3Q9HD45 589 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 SLC25A37Q9NYZ2 338 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 COL24A1Q17RW2 1714 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 WNK3Q9BYP7 1800 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 FAM172BPA6NC97 362 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 HAS3O00219 553 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 E2F3O00716 465 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 CASKO14936 926 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 PTTG1O95997 202 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 PDYNP01213 254 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 ATXN1LP0C7T5 689 aaKnown RBP11.43□□□□□ -0.58
CDH5-208ENST00000614547 TIE1P35590 1138 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 SLC35A2P78381 396 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 LRRC26Q2I0M4 334 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 OR8H3Q8N146 312 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 ARRDC2Q8TBH0 407 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 CD200R1Q8TD46 325 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 SNAPC3Q92966 411 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 CFL2Q9Y281 166 aa11.43□□□□□ -0.58
CDH5-208ENST00000614547 MYL9P24844 172 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 TNFSF8P32971 234 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 UBXN11Q5T124 520 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 PNCKQ6P2M8 343 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 CCDC149Q6ZUS6 474 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 MDGA1Q8NFP4 955 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 OR5M11Q96RB7 305 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 TPT1P8Q9HAU6 139 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 TVP23BQ9NYZ1 205 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 ZNF224Q9NZL3 707 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 TRPC4Q9UBN4 977 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 ACSL6Q9UKU0 697 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 COL2A1P02458 1487 aaPredicted RBP11.42□□□□□ -0.58
CDH5-208ENST00000614547 A0A1W2PQ09 198 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 I3L521 148 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 SNAI1O95863 264 aaPredicted RBP11.42□□□□□ -0.58
CDH5-208ENST00000614547 UQCRC1P31930 480 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 OLR1P78380 273 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 UGT8Q16880 541 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 ZMAT1Q5H9K5 638 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 SHQ1Q6PI26 577 aaKnown RBP11.42□□□□□ -0.58
CDH5-208ENST00000614547 USP30Q70CQ3 517 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 C16orf62Q7Z3J2 963 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 ELMOD1Q8N336 334 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 JPH3Q8WXH2 748 aaPredicted RBP11.42□□□□□ -0.58
CDH5-208ENST00000614547 ACAT2Q9BWD1 397 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 SLIRPQ9GZT3 109 aaKnown RBP11.42□□□□□ -0.58
CDH5-208ENST00000614547 TBC1D17Q9HA65 648 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 OSER1Q9NX31 292 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 MEIOCA2RUB1 952 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 ZNF197O14709 1029 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 CRISP3P54108 245 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 CAV3P56539 151 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 HNRNPA0Q13151 305 aaKnown RBP11.42□□□□□ -0.58
CDH5-208ENST00000614547 SLAMF1Q13291 335 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 TAF1AQ15573 450 aaPredicted RBP11.42□□□□□ -0.58
CDH5-208ENST00000614547 VMACQ2NL98 169 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 CPTPQ5TA50 214 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 RFPL4BQ6ZWI9 263 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 GLB1L3Q8NCI6 653 aaPredicted RBP11.42□□□□□ -0.58
CDH5-208ENST00000614547 TP53INP1Q96A56 240 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 VMP1Q96GC9 406 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 APIPQ96GX9 242 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 CNDP2Q96KP4 475 aaKnown RBP11.42□□□□□ -0.58
CDH5-208ENST00000614547 COL21A1Q96P44 957 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 SMURF1Q9HCE7 757 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 TLR9Q9NR96 1032 aa11.42□□□□□ -0.58
CDH5-208ENST00000614547 MKLN1Q9UL63 735 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms