RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 OTOAQ7RTW8 1153 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 ANKRD33Q7Z3H0 272 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 HOOK3Q86VS8 718 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 CREBRFQ8IUR6 639 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 ATAD1Q8NBU5 361 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 UXS1Q8NBZ7 420 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 GPRC5AQ8NFJ5 357 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 OR1L3Q8NH93 324 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 PIK3R3Q92569 461 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 LGALS12Q96DT0 336 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 KLHL5Q96PQ7 755 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 PARK7Q99497 189 aaKnown RBP3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 DESI2Q9BSY9 194 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 THAP2Q9H0W7 228 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 ATP13A3Q9H7F0 1226 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 RNF121Q9H920 327 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 PHPT1Q9NRX4 125 aaPredicted RBP3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 ARGLU1Q9NWB6 273 aaPredicted RBP3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 C2orf42Q9NWW7 574 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 CWC25Q9NXE8 425 aaPredicted RBP3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 EPHA6Q9UF33 1036 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 GAB2Q9UQC2 676 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 PPP2R2CQ9Y2T4 447 aa3.8□□□□□ -1.8
SMCHD1-213ENST00000609587 IL16Q14005 1332 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 IGSF1Q8N6C5 1336 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 MSGN1A6NI15 193 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 SNURFLB1AK76 121 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 PI4K2BG5E9Z4 385 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ST8SIA3O43173 380 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 RAF1P04049 648 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ATP1B1P05026 303 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ANKRD34CP0C6C1 535 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 CFC1BP0CG36 223 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 CFC1P0CG37 223 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 TCF7P36402 384 aaPredicted RBP3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 KCNJ1P48048 391 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 YWHAHQ04917 246 aaPredicted RBP3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 IL10RBQ08334 325 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 RBM39Q14498 530 aaKnown RBP3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 E2F5Q15329 346 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 EXT1Q16394 746 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 MEP1BQ16820 701 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ANKRD20A4Q4UJ75 823 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ANKRD20A8PQ5CZ79 823 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ANKRD20A2Q5SQ80 823 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ANKRD20A1Q5TYW2 823 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ANKRD20A3Q5VUR7 823 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 FAM46CQ5VWP2 391 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 TTC27Q6P3X3 843 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 FUT10Q6P4F1 479 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ARHGAP11AQ6P4F7 1023 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 PSRC1Q6PGN9 363 aaPredicted RBP3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 CROCCP3Q8IVE0 287 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 RCOR2Q8IZ40 523 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 LSMEM2Q8N112 164 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 RAB42Q8N4Z0 105 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 SLC37A3Q8NCC5 494 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 DDHD1Q8NEL9 900 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 DBF4BQ8NFT6 615 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 OR5AP2Q8NGF4 316 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 NCOA7Q8NI08 942 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 GRK7Q8WTQ7 553 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 LRR1Q96L50 414 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 C10orf90Q96M02 699 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 BTBD9Q96Q07 612 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 CDCA3Q99618 268 aaPredicted RBP3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 GPATCH1Q9BRR8 931 aaKnown RBP3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 P2RY12Q9H244 342 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ALDH8A1Q9H2A2 487 aaPredicted RBP3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 ZNF696Q9H7X3 374 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 SEPT10Q9P0V9 454 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 VPS18Q9P253 973 aa3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 RUVBL2Q9Y230 463 aaKnown RBP3.79□□□□□ -1.8
SMCHD1-213ENST00000609587 SMCHD1A6NHR9 2005 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 A0A087WW49 117 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 A0A0U1RQK1 487 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 ZNF320A2RRD8 509 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 A4D1N5 150 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 PRSS46E5RG02 174 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 SLCO1B7G3V0H7 640 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 MOCS2O96007 188 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 PAK4O96013 591 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 PRKAR1AP10644 381 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 SLC2A2P11168 524 aaPredicted RBP3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 F3P13726 295 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 SSTR1P30872 391 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 GLIPR1P48060 266 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 SNRPD1P62314 119 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 FOLH1Q04609 750 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 HNRNPDQ14103 355 aaKnown RBP3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 TRIM29Q14134 588 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 NFE2L1Q14494 772 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 CCDC6Q16204 474 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 ZNF74Q16587 644 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 GBP6Q6ZN66 633 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 PIGWQ7Z7B1 504 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 ZSCAN30Q86W11 494 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 LACC1Q8IV20 430 aa3.78□□□□□ -1.8
SMCHD1-213ENST00000609587 CCDC60Q8IWA6 550 aaPredicted RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms