RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ASF1AQ9Y294 204 aa10.06□□□□□ -0.8
CTCFL-216ENST00000608263 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-216ENST00000608263 TCF3P15923 654 aa10.06□□□□□ -0.8
CTCFL-216ENST00000608263 DNAJA1P31689 397 aaKnown RBP10.06□□□□□ -0.8
CTCFL-216ENST00000608263 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.06□□□□□ -0.8
CTCFL-216ENST00000608263 MMAAQ8IVH4 418 aaKnown RBP10.06□□□□□ -0.8
CTCFL-216ENST00000608263 LGI4Q8N135 537 aa10.06□□□□□ -0.8
CTCFL-216ENST00000608263 DEFB119Q8N690 84 aa10.06□□□□□ -0.8
CTCFL-216ENST00000608263 MYLIPQ8WY64 445 aa10.06□□□□□ -0.8
CTCFL-216ENST00000608263 NKX2-4Q9H2Z4 354 aa10.06□□□□□ -0.8
CTCFL-216ENST00000608263 FAM83DQ9H4H8 585 aa10.06□□□□□ -0.8
CTCFL-216ENST00000608263 ATAD5Q96QE3 1844 aa10.06□□□□□ -0.8
CTCFL-216ENST00000608263 LOC285095A0A1B0GVY8 99 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 SLC22A1O15245 554 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 GRM6O15303 877 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 ZNF623O75123 536 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 ADAMTS4O75173 837 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 TNFRSF21O75509 655 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 AP2A2O94973 939 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 RPP38P78345 283 aaKnown RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 CAP1Q01518 475 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 NFATC2Q13469 925 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 IER5LQ5T953 404 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 NCCRP1Q6ZVX7 275 aaPredicted RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 CEP68Q76N32 757 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 OTUB1Q96FW1 271 aaPredicted RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 RIPOR3Q96MK2 946 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 ZCCHC2Q9C0B9 1178 aaKnown RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 HDHD2Q9H0R4 259 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 TMEM245Q9H330 911 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 OR51B5Q9H339 312 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 DLGAP4Q9Y2H0 992 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 MRPS7Q9Y2R9 242 aaKnown RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 GMEB1Q9Y692 573 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 UTRNP46939 3433 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 SMAD6O43541 496 aaKnown RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 TACR1P25103 407 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 HNF1BP35680 557 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 MANFP55145 182 aaKnown RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 ERVK-21P61565 698 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 ABHD18Q0P651 414 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 HSPB3Q12988 150 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 SORCS1Q8WY21 1168 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 HERVK_113Q902F9 699 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 EXOSC8Q96B26 276 aaKnown RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 CLIP3Q96DZ5 547 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 APIPQ96GX9 242 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 SPACA7Q96KW9 195 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 ZNF347Q96SE7 839 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 KXD1Q9BQD3 176 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 IL23AQ9NPF7 189 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 HSFX1Q9UBD0 423 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 VPS29Q9UBQ0 182 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 ACSL6Q9UKU0 697 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 RWDD3Q9Y3V2 267 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 PMF1-BGLAPU3KQ54 211 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 ALOX5P09917 674 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 HRH2P25021 359 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 BUD31P41223 144 aaPredicted RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 HK3P52790 923 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 PYDC2Q56P42 97 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 TPRG1LQ5T0D9 272 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 TRIQKQ629K1 86 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 SUSD1Q6UWL2 747 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 Q6ZVL8 140 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 FAM217AQ8IXS0 508 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 APCDD1Q8J025 514 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 DEPDC4Q8N2C3 294 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 TSPEARQ8WU66 669 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 KAT2AQ92830 837 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 AHCYL2Q96HN2 611 aaKnown RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 PAK1IP1Q9NWT1 392 aaPredicted RBP10.05□□□□□ -0.8
CTCFL-216ENST00000608263 PRSS21Q9Y6M0 314 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 ANKRD31Q8N7Z5 1873 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 NINQ8N4C6 2090 aa10.05□□□□□ -0.8
CTCFL-216ENST00000608263 MROH6A6NGR9 719 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 H3BM21 787 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 STC2O76061 302 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 RHOP08100 348 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 STSP08842 583 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 NR2F1P10589 423 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 AMD1P17707 334 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 MYL12AP19105 171 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 CRHBPP24387 322 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 BDKRB1P46663 353 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 AP1S1P61966 158 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 CLCA4Q14CN2 919 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 TPGS2Q68CL5 300 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 NADSYN1Q6IA69 706 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 NIPAL1Q6NVV3 410 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 FAM131AQ6UXB0 335 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 CHRDL2Q6WN34 429 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 TAS1R1Q7RTX1 841 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 CYP4Z1Q86W10 505 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 DCP2Q8IU60 420 aaKnown RBP10.04□□□□□ -0.8
CTCFL-216ENST00000608263 CHDHQ8NE62 594 aaPredicted RBP10.04□□□□□ -0.8
CTCFL-216ENST00000608263 TEX12Q9BXU0 123 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 EQTNQ9NQ60 294 aa10.04□□□□□ -0.8
CTCFL-216ENST00000608263 CLEC4AQ9UMR7 237 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms