RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 VPS13CQ709C8 3753 aa11.1□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FAM237BA0A1B0GVD1 139 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 OR2W5A6NFC9 320 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 MROH6A6NGR9 719 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TFECO14948 347 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 AKR1B10O60218 316 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CDC40O60508 579 aaKnown RBP eCLIP11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PHF2O75151 1096 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CMPK1P30085 196 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RFC3P40938 356 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SNRPNP63162 240 aaKnown RBP11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ASTE1Q2TB18 679 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ZNF468Q5VIY5 522 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 TMEM211Q6ICI0 200 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ANKRD37Q7Z713 158 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 BIVMQ86UB2 503 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CLYBLQ8N0X4 340 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SHISA5Q8N114 240 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 KRT222Q8N1A0 295 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ARHGEF39Q8N4T4 335 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 GSDMBQ8TAX9 411 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 HMGCLL1Q8TB92 370 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ACTL9Q8TC94 416 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RND1Q92730 232 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RERGQ96A58 199 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 RMND5BQ96G75 393 aaPredicted RBP11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SEC16BQ96JE7 1060 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ALPK1Q96QP1 1244 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 FAM118BQ9BPY3 351 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 PLCD4Q9BRC7 762 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 GOLPH3Q9H4A6 298 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 SLC24A3Q9HC58 644 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 ZNF358Q9NW07 568 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 NFS1Q9Y697 457 aa11.09□□□□□ -0.63
PDLIM1P1-201ENST00000604187 CSPG4Q6UVK1 2322 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 FN1P02751 2386 aaKnown RBP11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 USP27XA6NNY8 438 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 P2RX6O15547 441 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PROM1O43490 865 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CTAG2O75638 210 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 C1orf105O95561 183 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 DNASE1P24855 282 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PSMA3P25788 255 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 AOAHP28039 575 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 AVPR1BP47901 424 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 DGKQP52824 942 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ADAM8P78325 824 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 EXT1Q16394 746 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SKOR2Q2VWA4 1001 aaPredicted RBP11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CCDC38Q502W7 563 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 DARS2Q6PI48 645 aaKnown RBP11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 AFTPHQ6ULP2 937 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PAQR7Q86WK9 346 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 ZZZ3Q8IYH5 903 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 RCOR2Q8IZ40 523 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR9A4Q8NGU2 314 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 M1APQ8TC57 530 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PWWP2AQ96N64 755 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR2A5Q96R48 311 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TTC1Q99614 292 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MDFIQ99750 246 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CLEC4MQ9H2X3 399 aaPredicted RBP11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TP63Q9H3D4 680 aaPredicted RBP11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 LRRC40Q9H9A6 602 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MMP25Q9NPA2 562 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SPTLC3Q9NUV7 552 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 HCN3Q9P1Z3 774 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 L3MBTL1Q9Y468 752 aa11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.08□□□□□ -0.64
PDLIM1P1-201ENST00000604187 IGKV1-8A0A0C4DH67 115 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SOWAHDA6NJG2 315 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 NDC80O14777 642 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 KLK8O60259 260 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 GOT2P00505 430 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 STATHP02808 62 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CYC1P08574 325 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 RBP3P10745 1247 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 XCR1P46094 333 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MEOX1P50221 254 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TAS2R50P59544 299 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 EIF3EP60228 445 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PMPCAQ10713 525 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TSTA3Q13630 321 aaPredicted RBP11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PTK6Q13882 451 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SFT2D3Q587I9 215 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CMPK2Q5EBM0 449 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TMEM198Q66K66 360 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 KCTD11Q693B1 232 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 PAPD4Q6PIY7 484 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 KLHDC8BQ8IXV7 354 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 LGI4Q8N135 537 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 OR13J1Q8NGT2 312 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 NANOS1Q8WY41 292 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 GPATCH1Q9BRR8 931 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 CARD6Q9BX69 1037 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 MRPS30Q9NP92 439 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SPATA7Q9P0W8 599 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 SLC2A6Q9UGQ3 507 aa11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 TSR3Q9UJK0 312 aaKnown RBP11.07□□□□□ -0.64
PDLIM1P1-201ENST00000604187 R3HDM2Q9Y2K5 976 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms