RNA–Protein interactions for RNA: ENST00000601372.5

ZNF558-207, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 2 BASIC

Gene ZNF558, Length 7,032 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-207ENST00000601372 SEMA3GQ9NS98 782 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 C1orf109Q9NX04 203 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 YBX2Q9Y2T7 364 aaKnown RBP10.74□□□□□ -0.69
ZNF558-207ENST00000601372 FAM221BA6H8Z2 402 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 ITGA2P17301 1181 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 TNFRSF4P43489 277 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 PTPN5P54829 565 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 TAS2R50P59544 299 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 DNAJB13P59910 316 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 GANABQ14697 944 aaKnown RBP10.74□□□□□ -0.69
ZNF558-207ENST00000601372 POMZP3Q6PJE2 187 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 RABEPKQ7Z6M1 372 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 LUZP2Q86TE4 346 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 ADGRG2Q8IZP9 1017 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 BIRC7Q96CA5 298 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 KCNC2Q96PR1 638 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 SORT1Q99523 831 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 RAPGEFL1Q9UHV5 662 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 EMCNQ9ULC0 261 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 CDC14AQ9UNH5 594 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 POLR1DQ9Y2S0 133 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 SH3GLB1Q9Y371 365 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 MAGEB17A8MXT2 336 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 CD1DP15813 335 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 UGT2B15P54855 530 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 RPS14P62263 151 aaKnown RBP10.74□□□□□ -0.69
ZNF558-207ENST00000601372 OR4D1Q15615 310 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 RFX4Q33E94 735 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 CLDN19Q8N6F1 224 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 ENKURQ8TC29 256 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 MEAF6Q9HAF1 191 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 MKS1Q9NXB0 559 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 ARFGEF1Q9Y6D6 1849 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 DUX1O43812 170 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 GM2AP17900 193 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 CDH12P55289 794 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 ARMC8Q8IUR7 673 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 METTL27Q8N6F8 245 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-207ENST00000601372 IL22RA1Q8N6P7 574 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 SLC43A3Q8NBI5 491 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 WDR36Q8NI36 951 aaKnown RBP10.74□□□□□ -0.69
ZNF558-207ENST00000601372 NODALQ96S42 347 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 UHRF1Q96T88 793 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-207ENST00000601372 FNDC11Q9BVV2 318 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 HRASLS2Q9NWW9 162 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 ERN1O75460 977 aaKnown RBP10.74□□□□□ -0.69
ZNF558-207ENST00000601372 IL12BP29460 328 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 CASRP41180 1078 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 OC90Q02509 493 aaPredicted RBP10.74□□□□□ -0.69
ZNF558-207ENST00000601372 CEACAM7Q14002 265 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 GJD3Q8N144 294 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 CACTIN-AS1Q8N1I8 211 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 RTP4Q96DX8 246 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 HSPBAP1Q96EW2 488 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 TMEM150CB9EJG8 249 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 H3BNH8 94 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 SOCS2O14508 198 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 HNRNPA2B1P22626 353 aaKnown RBP10.74□□□□□ -0.69
ZNF558-207ENST00000601372 CPN2P22792 545 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 ZNF789Q5FWF6 425 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 GCNT6Q5T4J0 391 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 BEND5Q7L4P6 421 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 SLC34A3Q8N130 599 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 RTP3Q9BQQ7 232 aa10.74□□□□□ -0.69
ZNF558-207ENST00000601372 LOC730098B7Z3J9 87 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 GJB3O75712 270 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 MRPS21P82921 87 aaKnown RBP10.73□□□□□ -0.69
ZNF558-207ENST00000601372 BNIP3Q12983 259 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 ZNF423Q2M1K9 1284 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 MBOAT1Q6ZNC8 495 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 TRAM1L1Q8N609 369 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 ATP6V1C2Q8NEY4 427 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 MCFD2Q8NI22 146 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 ZDHHC1Q8WTX9 485 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 HCN3Q9P1Z3 774 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 WDR90Q96KV7 1748 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 CHRM1P11229 460 aaPredicted RBP10.73□□□□□ -0.69
ZNF558-207ENST00000601372 CDK9P50750 372 aaKnown RBP10.73□□□□□ -0.69
ZNF558-207ENST00000601372 STC1P52823 247 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 PIGFQ07326 219 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 HSPB3Q12988 150 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 UNC50Q53HI1 259 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 OR4F3Q6IEY1 312 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 USP53Q70EK8 1073 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 NPAS3Q8IXF0 933 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 ACVR1CQ8NER5 493 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 SLC9A6Q92581 669 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 NLE1Q9NVX2 485 aaPredicted RBP10.73□□□□□ -0.69
ZNF558-207ENST00000601372 OR6C74A6NCV1 312 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 CAPN14A8MX76 684 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 WASH3PC4AMC7 463 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 FOXD2O60548 495 aaPredicted RBP10.73□□□□□ -0.69
ZNF558-207ENST00000601372 BIKQ13323 160 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 GRIN2CQ14957 1233 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 Q6ZSR6 202 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 TMEM135Q86UB9 458 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 UMODL1-AS1Q8N2C9 162 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 SCAIQ8N9R8 606 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 S100ZQ8WXG8 99 aa10.73□□□□□ -0.69
ZNF558-207ENST00000601372 TSGA13Q96PP4 275 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms