RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 ZNF382Q96SR6 550 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 GATA5Q9BWX5 397 aaPredicted RBP11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 SEMA6CQ9H3T2 930 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 GSTO2Q9H4Y5 243 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 POLR1BQ9H9Y6 1135 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 PELI2Q9HAT8 420 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 ENAMQ9NRM1 1142 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 TMEM184CQ9NVA4 438 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 TAC3Q9UHF0 121 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 SNX7Q9UNH6 387 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 SATB2Q9UPW6 733 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 BTRCQ9Y297 605 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 LRRK2Q5S007 2527 aa11.19□□□□□ -0.62
CHMP2A-207ENST00000600804 IGKV1-8A0A0C4DH67 115 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 OR2A25A4D2G3 310 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 TMEM114B3SHH9 223 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 B8ZZF3 427 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 CCNT2O60583 730 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 OTCP00480 354 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 CHN1P15882 459 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 CCKBRP32239 447 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 GRIA3P42263 894 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 CCR8P51685 355 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 ERVPABLB-1P60509 514 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 SPIDRQ14159 915 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 AMZ1Q400G9 498 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 C3orf38Q5JPI3 329 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 CFAP157Q5JU67 520 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 C10orf62Q5T681 223 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 THEMIS2Q5TEJ8 643 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 LIPJQ5W064 366 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 IRGCQ6NXR0 463 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 IGF2-ASQ6U949 168 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 NXPE4Q6UWF7 544 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 ZNF574Q6ZN55 896 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 SLCO4C1Q6ZQN7 724 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 RGS9BPQ6ZS82 235 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 GOLGA7Q7Z5G4 137 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 FAM129CQ86XR2 697 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 KIRREL3Q8IZU9 778 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 C2orf73Q8N5S3 287 aaPredicted RBP11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 TEX9Q8N6V9 391 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 FAM76AQ8TAV0 307 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 KLHL6Q8WZ60 621 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 NEIL2Q969S2 332 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 ESAMQ96AP7 390 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 SEC16BQ96JE7 1060 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 SLC41A2Q96JW4 573 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 TMEM74Q96NL1 305 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 DEPDC7Q96QD5 511 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 NUDT22Q9BRQ3 303 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 MECRQ9BV79 373 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 DRC3Q9H069 523 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 ZNF768Q9H5H4 540 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 NT5DC2Q9H857 520 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 ZBTB26Q9HCK0 441 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 MRPS30Q9NP92 439 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 INTS9Q9NV88 658 aaKnown RBP11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 TSC22D4Q9Y3Q8 395 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 DYRK1BQ9Y463 629 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 SDK2Q58EX2 2172 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 TEX15Q9BXT5 2789 aa11.18□□□□□ -0.62
CHMP2A-207ENST00000600804 IGHV5-10-1A0A0J9YXX1 117 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 LRRC14BA6NHZ5 514 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 CDRT15L2A8MXV6 281 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 OR7A17O14581 309 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 HGSO14964 777 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 CLGNO14967 610 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 EFSO43281 561 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 SUPT7LO94864 414 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 ZBTB11O95625 1053 aaPredicted RBP11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 EBLN1P0CF75 366 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 C1GALT1C1LP0DN25 315 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 CXCR2P25025 360 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 PSMB5P28074 263 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 GSTM2P28161 218 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 HNF4AP41235 474 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 PKNOX1P55347 436 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 GFERP55789 205 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 PPP1CAP62136 330 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 VAC14Q08AM6 782 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 TRAF3Q13114 568 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 LAPTM5Q13571 262 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 RCN2Q14257 317 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 FBXO48Q5FWF7 155 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 FIGLAQ6QHK4 219 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 RBM44Q6ZP01 1051 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 USP53Q70EK8 1073 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 TMPRSS9Q7Z410 1059 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 TAX1BP1Q86VP1 789 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 PAQR7Q86WK9 346 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 LSMEM2Q8N112 164 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 PPP4R1Q8TF05 950 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 THAP11Q96EK4 314 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 PTCD3Q96EY7 689 aaKnown RBP11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 TCTN2Q96GX1 697 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 TGM7Q96PF1 710 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 TRAPPC9Q96Q05 1148 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 MAP3K3Q99759 626 aa11.17□□□□□ -0.62
CHMP2A-207ENST00000600804 PLCD4Q9BRC7 762 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms