RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 RBBP5Q15291 538 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 VPS26BQ4G0F5 336 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 ADNP2Q6IQ32 1131 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 NOXRED1Q6NXP6 359 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 HACD2Q6Y1H2 254 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 PGAM4Q8N0Y7 254 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 GLB1L3Q8NCI6 653 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 ZNF740Q8NDX6 193 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 FAM46DQ8NEK8 389 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 SLC22A18Q96BI1 424 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 PRAP1Q96NZ9 151 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 DPY30Q9C005 99 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 MRPS30Q9NP92 439 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 DMRT3Q9NQL9 472 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 BAIAP2L1Q9UHR4 511 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 A0A1W2PP18 115 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 CCDC154A6NI56 674 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 LAMTOR5O43504 91 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 MYO1DO94832 1006 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 CAPN3P20807 821 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 CMPK1P30085 196 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 CSNK1G2P78368 415 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 ACSM2AQ08AH3 577 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 SF1Q15637 639 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 ACSM2BQ68CK6 577 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 FAM13CQ8NE31 585 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 CHTF18Q8WVB6 975 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 JPH3Q8WXH2 748 aaPredicted RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 ROPN1LQ96C74 230 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 APOLD1Q96LR9 279 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 SERPINI1Q99574 410 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 WDR41Q9HAD4 459 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 TMEM184CQ9NVA4 438 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 SPHK1Q9NYA1 384 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 SPASTQ9UBP0 616 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 PRPF19Q9UMS4 504 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 DLGAP4Q9Y2H0 992 aa16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.97■□□□□ 0.31
SHKBP1-224ENST00000600718 A0A088AWK7 358 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 ANKDD1BA6NHY2 528 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 ISM1B1AKI9 464 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 BCAT2O15382 392 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 TDGF1P13385 188 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 PTX3P26022 381 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 PEBP1P30086 187 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 CLDN8P56748 225 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 TBL3Q12788 808 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 PLCL1Q15111 1095 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 SPIN4Q56A73 249 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 SLC9B2Q86UD5 537 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 C11orf74Q86VG3 221 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 GKN2Q86XP6 184 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 RBM12BQ8IXT5 1001 aaKnown RBP16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 ULK2Q8IYT8 1036 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 ADGRF3Q8IZF5 1079 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 NAGSQ8N159 534 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 OR2L3Q8NG85 312 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 ZDHHC1Q8WTX9 485 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 C11orf24Q96F05 449 aaPredicted RBP16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 TWSG1Q9GZX9 223 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 SIRT5Q9NXA8 310 aa16.96■□□□□ 0.31
SHKBP1-224ENST00000600718 FAM221BA6H8Z2 402 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 C9JVG2 144 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 ETHE1O95571 254 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 AFF3P51826 1226 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 C21orf59P57076 290 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 GPR18Q14330 331 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 PTGR1Q14914 329 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 KIR2DS3Q14952 304 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 ARMCX6Q7L4S7 300 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 SDR16C5Q8N3Y7 309 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 SLC37A2Q8TED4 501 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 PATE1Q8WXA2 126 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 GID8Q9NWU2 228 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 IGKV1-8A0A0C4DH67 115 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 BTN3A3O00478 584 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 TGFB1P01137 390 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 SDC1P18827 310 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 CSNK1EP49674 416 aaKnown RBP16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 HNRNPKP61978 463 aaKnown RBP eCLIP16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 PGM2L1Q6PCE3 622 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 VN1R5Q7Z5H4 357 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 RETREG3Q86VR2 466 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 AVL9Q8NBF6 648 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 LMX1AQ8TE12 382 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 SLC45A3Q96JT2 553 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 MAP10Q9P2G4 905 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 LEF1Q9UJU2 399 aaPredicted RBP16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 CROTQ9UKG9 612 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 SNX7Q9UNH6 387 aa16.95■□□□□ 0.3
SHKBP1-224ENST00000600718 TRBC2A0A5B9 178 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 CFLARO15519 480 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 EEDO75530 441 aaKnown RBP16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 GRK3P35626 688 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 TLR1Q15399 786 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 TEAD4Q15561 434 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 ZNF423Q2M1K9 1284 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 ADCK2Q7Z695 626 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 C1orf210Q8IVY1 113 aa16.94■□□□□ 0.3
SHKBP1-224ENST00000600718 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms