RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 CCDC189A1A4V9 331 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 HYKKA2RU49 373 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 H0YGG7 62 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 H7BY64 318 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 HAT1O14929 419 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 ABHD2P08910 425 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 PIM1P11309 404 aaPredicted RBP15.44■□□□□ 0.06
LSM4-206ENST00000600289 ITGAXP20702 1163 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 ARF3P61204 181 aaPredicted RBP15.44■□□□□ 0.06
LSM4-206ENST00000600289 RPS15AP62244 130 aaKnown RBP15.44■□□□□ 0.06
LSM4-206ENST00000600289 CSNK1G2P78368 415 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 NKAIN1Q4KMZ8 207 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 UBAP2Q5T6F2 1119 aaKnown RBP15.44■□□□□ 0.06
LSM4-206ENST00000600289 GARNL3Q5VVW2 1013 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 PRMT9Q6P2P2 845 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 TTLL10Q6ZVT0 673 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 FRA10AC1Q70Z53 315 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 OR4N4Q8N0Y3 316 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 TCAIMQ8N3R3 496 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 ARHGEF39Q8N4T4 335 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 OR4K1Q8NGD4 311 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 ADAMTS17Q8TE56 1095 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 SLC44A1Q8WWI5 657 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 THAP4Q8WY91 577 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 EXTL1Q92935 676 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 MVB12AQ96EY5 273 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 PRAP1Q96NZ9 151 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 PSMG3-AS1Q96PY0 264 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 OR4K3Q96R72 315 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 SLC26A1Q9H2B4 701 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 ADNPQ9H2P0 1102 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 NFU1Q9UMS0 254 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 SH2B3Q9UQQ2 575 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 POLHQ9Y253 713 aa15.44■□□□□ 0.06
LSM4-206ENST00000600289 SPENQ96T58 3664 aaKnown RBP15.44■□□□□ 0.06
LSM4-206ENST00000600289 HMX2A2RU54 273 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 ZNF500O60304 480 aaPredicted RBP15.43■□□□□ 0.06
LSM4-206ENST00000600289 KLF7O75840 302 aaPredicted RBP15.43■□□□□ 0.06
LSM4-206ENST00000600289 ACSL3O95573 720 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 GUCA1CO95843 209 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 ALBP02768 609 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 FURINP09958 794 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 PRKAR1AP10644 381 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 GGT5P36269 586 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 SLC6A12P48065 614 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 RPS18P62269 152 aaKnown RBP15.43■□□□□ 0.06
LSM4-206ENST00000600289 IL10RAQ13651 578 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 ERV3-1Q14264 604 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 TGFBIQ15582 683 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 MUM1Q2TAK8 710 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 C1orf189Q5VU69 101 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 TRMT10CQ7L0Y3 403 aaKnown RBP15.43■□□□□ 0.06
LSM4-206ENST00000600289 ADCK2Q7Z695 626 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 CMC1Q7Z7K0 106 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 CSNK1A1LQ8N752 337 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 ISL2Q96A47 359 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 RERGQ96A58 199 aaPredicted RBP15.43■□□□□ 0.06
LSM4-206ENST00000600289 KIAA1191Q96A73 305 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 RHBDF1Q96CC6 855 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 C10orf90Q96M02 699 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 WDR54Q9H977 334 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 SLC22A11Q9NSA0 550 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 ABCF3Q9NUQ8 709 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 IFT80Q9P2H3 777 aaPredicted RBP15.43■□□□□ 0.06
LSM4-206ENST00000600289 TUBD1Q9UJT1 453 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 MAN2B2Q9Y2E5 1009 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 PCSK5Q92824 1860 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 LRBAP50851 2863 aa15.43■□□□□ 0.06
LSM4-206ENST00000600289 NBASA2RRP1 2371 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 A0A087WUV0 522 aaPredicted RBP15.42■□□□□ 0.06
LSM4-206ENST00000600289 A0A087X1B8 175 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 IPO13O94829 963 aaKnown RBP15.42■□□□□ 0.06
LSM4-206ENST00000600289 RHOXF2BP0C7M4 288 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 SFTPCP11686 197 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 TLE1Q04724 770 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 ATP1A1-AS1Q5TC04 95 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 C16orf46Q6P387 395 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 TBC1D1Q86TI0 1168 aaPredicted RBP15.42■□□□□ 0.06
LSM4-206ENST00000600289 APLFQ8IW19 511 aaPredicted RBP15.42■□□□□ 0.06
LSM4-206ENST00000600289 PDPRQ8NCN5 879 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 LRRN4CLQ8ND94 238 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 OR2Y1Q8NGV0 311 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 PTERQ96BW5 349 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 PYCR2Q96C36 320 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 TM4SF19Q96DZ7 209 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 EGFL8Q99944 293 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 RHOXF2Q9BQY4 288 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 TXLNGYQ9BZA5 131 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 NMRAL1Q9HBL8 299 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 NDOR1Q9UHB4 597 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 GPN3Q9UHW5 284 aaPredicted RBP15.42■□□□□ 0.06
LSM4-206ENST00000600289 ZNF180Q9UJW8 692 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 RUVBL1Q9Y265 456 aaKnown RBP15.42■□□□□ 0.06
LSM4-206ENST00000600289 KCNMB2Q9Y691 235 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 CACNA1DQ01668 2161 aa15.42■□□□□ 0.06
LSM4-206ENST00000600289 CDC14CA4D256 554 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 CNOT3O75175 753 aaKnown RBP15.41■□□□□ 0.06
LSM4-206ENST00000600289 MED26O95402 600 aa15.41■□□□□ 0.06
LSM4-206ENST00000600289 EIF2S1P05198 315 aaKnown RBP15.41■□□□□ 0.06
LSM4-206ENST00000600289 CDH1P12830 882 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms