RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 HIST1H2ADP20671 130 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 AVPR1BP47901 424 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 IL2P60568 153 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 TBPL1P62380 186 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 Q0VFX4 171 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 FRG1Q14331 258 aaKnown RBP15.01□□□□□ -0.01
VRK3-221ENST00000600284 HIBCHQ6NVY1 386 aaPredicted RBP15.01□□□□□ -0.01
VRK3-221ENST00000600284 AGTRAPQ6RW13 159 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 LCTLQ6UWM7 567 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 ISLR2Q6UXK2 745 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 CUZD1Q86UP6 607 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 LAPTM4BQ86VI4 370 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 C17orf64Q86WR6 236 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 CREG2Q8IUH2 290 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 IGDCC3Q8IVU1 814 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 KBTBD2Q8IY47 623 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 PRSS58Q8IYP2 241 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 DNAJB14Q8TBM8 379 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 C19orf60Q96EN9 201 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 HIST1H2AHQ96KK5 128 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 HIST1H2AJQ99878 128 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 H2AFJQ9BTM1 129 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 YIPF2Q9BWQ6 316 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 LRRC4CQ9HCJ2 640 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 ASF1BQ9NVP2 202 aa15.01□□□□□ -0.01
VRK3-221ENST00000600284 A0A0A6YYC8 382 aaPredicted RBP15□□□□□ -0.01
VRK3-221ENST00000600284 NSG1A0A0A6YYJ2 146 aa15□□□□□ -0.01
VRK3-221ENST00000600284 BLACEA4D250 179 aa15□□□□□ -0.01
VRK3-221ENST00000600284 CYSRT1A8MQ03 144 aa15□□□□□ -0.01
VRK3-221ENST00000600284 I3L1I5 382 aaPredicted RBP15□□□□□ -0.01
VRK3-221ENST00000600284 BANF1O75531 89 aa15□□□□□ -0.01
VRK3-221ENST00000600284 NSA2O95478 260 aaKnown RBP15□□□□□ -0.01
VRK3-221ENST00000600284 CBX6O95503 412 aa15□□□□□ -0.01
VRK3-221ENST00000600284 HEXBP07686 556 aa15□□□□□ -0.01
VRK3-221ENST00000600284 CYC1P08574 325 aa15□□□□□ -0.01
VRK3-221ENST00000600284 ICAM2P13598 275 aa15□□□□□ -0.01
VRK3-221ENST00000600284 ELK3P41970 407 aa15□□□□□ -0.01
VRK3-221ENST00000600284 TSFMP43897 325 aaKnown RBP15□□□□□ -0.01
VRK3-221ENST00000600284 GLRBP48167 497 aa15□□□□□ -0.01
VRK3-221ENST00000600284 CDKN2DP55273 166 aa15□□□□□ -0.01
VRK3-221ENST00000600284 AP1S2P56377 157 aa15□□□□□ -0.01
VRK3-221ENST00000600284 AP2B1P63010 937 aa15□□□□□ -0.01
VRK3-221ENST00000600284 CSNK1G2P78368 415 aa15□□□□□ -0.01
VRK3-221ENST00000600284 DR1Q01658 176 aa15□□□□□ -0.01
VRK3-221ENST00000600284 PDAP1Q13442 181 aaKnown RBP15□□□□□ -0.01
VRK3-221ENST00000600284 RBM20Q5T481 1227 aaKnown RBP15□□□□□ -0.01
VRK3-221ENST00000600284 B3GNTL1Q67FW5 361 aaPredicted RBP15□□□□□ -0.01
VRK3-221ENST00000600284 FAM45BPQ6NSW5 357 aa15□□□□□ -0.01
VRK3-221ENST00000600284 PLD3Q8IV08 490 aa15□□□□□ -0.01
VRK3-221ENST00000600284 SPNS2Q8IVW8 549 aa15□□□□□ -0.01
VRK3-221ENST00000600284 CAMKVQ8NCB2 501 aa15□□□□□ -0.01
VRK3-221ENST00000600284 FAM45AQ8TCE6 357 aa15□□□□□ -0.01
VRK3-221ENST00000600284 HAUS8Q9BT25 410 aa15□□□□□ -0.01
VRK3-221ENST00000600284 SGPP1Q9BX95 441 aa15□□□□□ -0.01
VRK3-221ENST00000600284 TRIM54Q9BYV2 358 aa15□□□□□ -0.01
VRK3-221ENST00000600284 PLAC1Q9HBJ0 212 aa15□□□□□ -0.01
VRK3-221ENST00000600284 ZNF160Q9HCG1 818 aa15□□□□□ -0.01
VRK3-221ENST00000600284 PPANQ9NQ55 473 aaKnown RBP15□□□□□ -0.01
VRK3-221ENST00000600284 AGPAT4Q9NRZ5 378 aa15□□□□□ -0.01
VRK3-221ENST00000600284 RNF14Q9UBS8 474 aa15□□□□□ -0.01
VRK3-221ENST00000600284 VWA7Q9Y334 891 aa15□□□□□ -0.01
VRK3-221ENST00000600284 SAR1BQ9Y6B6 198 aa15□□□□□ -0.01
VRK3-221ENST00000600284 TEX264Q9Y6I9 313 aa15□□□□□ -0.01
VRK3-221ENST00000600284 ESPL1Q14674 2120 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 LOC102723996A0A087X1L8 192 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 IGHV1-45A0A0A0MS14 117 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 PABPN1LA6NDY0 278 aaKnown RBP14.99□□□□□ -0.01
VRK3-221ENST00000600284 CCDC188H7C350 402 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 P2RX6O15547 441 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 TSPAN12O95859 305 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 DDAH2O95865 285 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 SERPINA7P05543 415 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 COX6A1P12074 109 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 NPPBP16860 134 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 GRK3P35626 688 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 ARL4CP56559 192 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 GNG11P61952 73 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 MFAP5Q13361 173 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 MRPL49Q13405 166 aaKnown RBP14.99□□□□□ -0.01
VRK3-221ENST00000600284 NAE1Q13564 534 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 TLR1Q15399 786 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 HIF1AQ16665 826 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 EIF2S3LQ2VIR3 472 aaKnown RBP14.99□□□□□ -0.01
VRK3-221ENST00000600284 HECTD2Q5U5R9 776 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 STEAP4Q687X5 459 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 DUPD1Q68J44 220 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 CAPN13Q6MZZ7 669 aaPredicted RBP14.99□□□□□ -0.01
VRK3-221ENST00000600284 TMEM205Q6UW68 189 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 RIPOR1Q6ZS17 1223 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 VN1R4Q7Z5H5 301 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 KLHL7Q8IXQ5 586 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 SSC4DQ8WTU2 575 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 ATL1Q8WXF7 558 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 ANP32BQ92688 251 aaKnown RBP14.99□□□□□ -0.01
VRK3-221ENST00000600284 C8orf44Q96CB5 159 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 TM4SF19Q96DZ7 209 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 LINGO1Q96FE5 620 aa14.99□□□□□ -0.01
VRK3-221ENST00000600284 PDLIM5Q96HC4 596 aaKnown RBP14.99□□□□□ -0.01
VRK3-221ENST00000600284 NAPGQ99747 312 aaPredicted RBP14.99□□□□□ -0.01
VRK3-221ENST00000600284 SARGQ9BW04 601 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms