RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 PRAMEF10O60809 474 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 CPNE3O75131 537 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 SCRG1O75711 98 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 IMPDH1P20839 514 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 SERPINB1P30740 379 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 HNF4AP41235 474 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 AGTR2P50052 363 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 PCBP4P57723 403 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 DNAJB13P59910 316 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 YBX1P67809 324 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 IRF8Q02556 426 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 HIST2H2ACQ16777 129 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 GARNL3Q5VVW2 1013 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 LIPJQ5W064 366 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 HIST2H2AA3Q6FI13 130 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 C16orf46Q6P387 395 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 UNQ6494/PRO21346Q6UXR6 183 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 ZYG11AQ6WRX3 759 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 TMPRSS11BQ86T26 416 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 EXOC3L1Q86VI1 746 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 TMEM126BQ8IUX1 230 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 SNX31Q8N9S9 440 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 TRPV3Q8NET8 790 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 OR1L3Q8NH93 324 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 SREK1Q8WXA9 508 aaKnown RBP15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 PHF21BQ96EK2 531 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 L3HYPDHQ96EM0 354 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 ULBP3Q9BZM4 244 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 ACBD3Q9H3P7 528 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 CENPHQ9H3R5 247 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 APMAPQ9HDC9 416 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 EMCNQ9ULC0 261 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 PCDHGA4Q9Y5G9 962 aa15.85■□□□□ 0.13
SHKBP1-219ENST00000599575 A0A0J9YVX5 310 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 PMS2P1A4D2B8 440 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 HAT1O14929 419 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 TM9SF1O15321 606 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 PRPF4O43172 522 aaKnown RBP eCLIP15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 DLX3O60479 287 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 WFS1O76024 890 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 CAPNS1P04632 268 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 RPS17P08708 135 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 CPA3P15088 417 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 EEF1DP29692 281 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 SLC18A1P54219 525 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 REEP5Q00765 189 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 PWP1Q13610 501 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 GTF2H2Q13888 395 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 C18orf21Q32NC0 220 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 CATSPEREQ5SY80 951 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 RHBDD2Q6NTF9 364 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 PWWP2BQ6NUJ5 590 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 GTF2H2CQ6P1K8 395 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 TMIGD1Q6UXZ0 262 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 TEX9Q8N6V9 391 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 TTC29Q8NA56 475 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 MFSD9Q8NBP5 474 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 CAMKVQ8NCB2 501 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 ZNF248Q8NDW4 579 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 PROKR1Q8TCW9 393 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 ESAMQ96AP7 390 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 MVB12AQ96EY5 273 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 CTRCQ99895 268 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 C17orf62Q9BQA9 187 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 NDC1Q9BTX1 674 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 NTMT1Q9BV86 223 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 DPH1Q9BZG8 443 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 IPPKQ9H8X2 491 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 TMBIM4Q9HC24 238 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 ADGRE2Q9UHX3 823 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 ZFP69BQ9UJL9 534 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 PCTPQ9UKL6 214 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 TSC22D4Q9Y3Q8 395 aa15.84■□□□□ 0.13
SHKBP1-219ENST00000599575 FOXO6A8MYZ6 492 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 G3V2L1 256 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 H0YGG7 62 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 STK17BO94768 372 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 ZWINTO95229 277 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 MLYCDO95822 493 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 DLGAP3O95886 979 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 OTCP00480 354 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 SLC35G6P0C7Q6 338 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 LIPCP11150 499 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 SCTRP47872 440 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 ARF3P61204 181 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 CHIT1Q13231 466 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 XKR6Q5GH73 641 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 WASHC2DQ5SRD0 308 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 ZNF678Q5SXM1 525 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 AGBL2Q5U5Z8 902 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 NIPAL1Q6NVV3 410 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 DTX1Q86Y01 620 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 ESX1Q8N693 406 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 GOLGA6L1Q8N7Z2 621 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 CCDC63Q8NA47 563 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 TCP10LQ8TDR4 215 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 PPP4R1Q8TF05 950 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 REPS1Q96D71 796 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 TM4SF19Q96DZ7 209 aa15.83■□□□□ 0.12
SHKBP1-219ENST00000599575 SLC7A5P2Q9GIP4 190 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms