RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 ACANP16112 2415 aa13.33□□□□□ -0.28
SHKBP1-218ENST00000598907 PCM1Q15154 2024 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 NUP210LQ5VU65 1888 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 IQANK1A0A1B0GTG1 560 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 FAM95CA0A1B0GW59 222 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 TLDC2A0PJX2 215 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 OR5K3A6NET4 321 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 WISP3O95389 354 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 OR56A5P0C7T3 313 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 SPTBP11277 2137 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 KLK2P20151 261 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 FDXRP22570 491 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 HALP42357 657 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 CDKN2DP55273 166 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 TAS2R39P59534 338 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 POU4F1Q01851 419 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 BMPR2Q13873 1038 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 SSPNQ14714 243 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 ZKSCAN8Q15776 578 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 KRT71Q3SY84 523 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 MROH9Q5TGP6 573 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 C1orf189Q5VU69 101 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 AGAP7PQ5VUJ5 663 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 FAAH2Q6GMR7 532 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 TMEM220Q6QAJ8 160 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 MEX3BQ6ZN04 569 aaKnown RBP13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 LINC00696Q6ZRV3 163 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 C11orf96Q7Z7L8 435 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 TGIF2LYQ8IUE0 185 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 CATSPER1Q8NEC5 780 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 LKAAEAR1Q8TD35 194 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 NAT14Q8WUY8 206 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 NR4A3Q92570 626 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 KCNJ9Q92806 393 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 MTBPQ96DY7 904 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 PGM2Q96G03 612 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 PKNOX2Q96KN3 472 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 AGAP4Q96P64 663 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 NDNQ99608 321 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 MDFIQ99750 246 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 OLFM1Q99784 485 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 SH3GL2Q99962 352 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 EPS8L2Q9H6S3 715 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 HRASLS2Q9NWW9 162 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 PSMD13Q9UNM6 376 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 BTRCQ9Y297 605 aa13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 DNMT3AQ9Y6K1 912 aaPredicted RBP13.32□□□□□ -0.28
SHKBP1-218ENST00000598907 SLC9B1P1A6NJY1 282 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 SMIM23A6NLE4 172 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 OR2AG2A6NM03 316 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 IQCF5A8MTL0 148 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 TRIM49D1C9J1S8 452 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 KMOO15229 486 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 NIPSNAP2O75323 286 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 ALDOAP04075 364 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 GSTM1P09488 218 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 CLCN7P51798 805 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 GSTM4Q03013 218 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 AIMP2Q13155 320 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 GTF2H3Q13889 308 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 AGAP9Q5VTM2 703 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 PTRHD1Q6GMV3 140 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 ARMC6Q6NXE6 501 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 SH2D5Q6ZV89 423 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 Q71RC1 249 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 DET1Q7L5Y6 550 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 OOSP2Q86WS3 158 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 GPATCH11Q8N954 259 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 OR1N1Q8NGS0 311 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 NRGNQ92686 78 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 TAAR6Q96RI8 345 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 TIMM29Q9BSF4 260 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 CCDC68Q9H2F9 335 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 POPDC3Q9HBV1 291 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 TMBIM4Q9HC24 238 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 SLC6A20Q9NP91 592 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 IMP3Q9NV31 184 aaKnown RBP13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 KLHL42Q9P2K6 505 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 GALPQ9UBC7 116 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 TBK1Q9UHD2 729 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 FBXL4Q9UKA2 621 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 SLC39A10Q9ULF5 831 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 DHRS7Q9Y394 339 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 CACNA1CQ13936 2221 aa13.31□□□□□ -0.28
SHKBP1-218ENST00000598907 C17orf113A0A1B0GUU1 675 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 F8W8V4 182 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 ZNF749O43361 778 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 CLDN14O95500 239 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 FTH1P02794 183 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 CBSLP0DN79 551 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 ESRRAP11474 423 aaPredicted RBP13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 CDH3P22223 829 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 AOAHP28039 575 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 CCR7P32248 378 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 CBSP35520 551 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 SKIV2L2P42285 1042 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 PREPP48147 710 aa13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 KPNA2P52292 529 aaKnown RBP13.3□□□□□ -0.28
SHKBP1-218ENST00000598907 SMSP52788 366 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms