RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 RNF11Q9Y3C5 154 aa8.92□□□□□ -0.98
ZNF548-206ENST00000597047 ACTL7BQ9Y614 415 aa8.92□□□□□ -0.98
ZNF548-206ENST00000597047 DCHS1Q96JQ0 3298 aa8.92□□□□□ -0.98
ZNF548-206ENST00000597047 LOC105369274A0A096LPK9 316 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 LOC102723532A0A0G2JNH3 316 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 ANKDD1BA6NHY2 528 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 HMGB1P1B2RPK0 211 aaPredicted RBP8.91□□□□□ -0.98
ZNF548-206ENST00000597047 H0YGG7 62 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 E2F3O00716 465 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 PPP6CO00743 305 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 OR7A17O14581 309 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 PRPF4O43172 522 aaKnown RBP eCLIP8.91□□□□□ -0.98
ZNF548-206ENST00000597047 KLK8O60259 260 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 TRIM13O60858 407 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 OR2B3O76000 313 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 OR4F21O95013 312 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 NTRK1P04629 796 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 BPGMP07738 259 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 ANKRD34CP0C6C1 535 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 BGNP21810 368 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 HRH2P25021 359 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 CXCR2P25025 360 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 BCL6P41182 706 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 SERPINB4P48594 390 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 ATP1A2P50993 1020 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 PRKAA2P54646 552 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 ITGA1P56199 1179 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 ARF3P61204 181 aaPredicted RBP8.91□□□□□ -0.98
ZNF548-206ENST00000597047 HERVK_113P63132 956 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 MC2RQ01718 297 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 ASPHQ12797 758 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 NAA25Q14CX7 972 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 CHI3L2Q15782 390 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 TNFAIP8L3Q5GJ75 292 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 WASHC2DQ5SRD0 308 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 DCAF12Q5T6F0 453 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 C1orf189Q5VU69 101 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 SCIMPQ6UWF3 145 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 SLCO4C1Q6ZQN7 724 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 PPP1R3BQ86XI6 285 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 OR4N4Q8N0Y3 316 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 KRT78Q8N1N4 520 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 D2HGDHQ8N465 521 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 DNAJC22Q8N4W6 341 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 METTL27Q8N6F8 245 aaPredicted RBP8.91□□□□□ -0.98
ZNF548-206ENST00000597047 OR52B6Q8NGF0 335 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 ZCCHC10Q8TBK6 192 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 AGR3Q8TD06 166 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 UBTD2Q8WUN7 234 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 GRAMD1AQ96CP6 724 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 CLIP3Q96DZ5 547 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 LIN37Q96GY3 246 aaPredicted RBP8.91□□□□□ -0.98
ZNF548-206ENST00000597047 SLC41A2Q96JW4 573 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 TAAR9Q96RI9 348 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 ZFYVE21Q9BQ24 234 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 YIPF2Q9BWQ6 316 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 GATA5Q9BWX5 397 aaPredicted RBP8.91□□□□□ -0.98
ZNF548-206ENST00000597047 ERVK-6Q9BXR3 956 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 POLR1BQ9H9Y6 1135 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 SSU72Q9NP77 194 aaKnown RBP8.91□□□□□ -0.98
ZNF548-206ENST00000597047 GPRC5BQ9NZH0 403 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 PDP2Q9P2J9 529 aa8.91□□□□□ -0.98
ZNF548-206ENST00000597047 COL27A1Q8IZC6 1860 aaPredicted RBP8.91□□□□□ -0.98
ZNF548-206ENST00000597047 HEATR5BQ9P2D3 2071 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 A0A1W2PNU3 283 aaPredicted RBP8.9□□□□□ -0.98
ZNF548-206ENST00000597047 MED19A0JLT2 244 aaPredicted RBP8.9□□□□□ -0.98
ZNF548-206ENST00000597047 OR2A25A4D2G3 310 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 POLR3GO15318 223 aaPredicted RBP8.9□□□□□ -0.98
ZNF548-206ENST00000597047 TM9SF1O15321 606 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 NDUFS4O43181 175 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 PRAMEF4O60810 478 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 SCRG1O75711 98 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 KIAA0754O94854 1291 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 FKBP9O95302 570 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 CLDN9O95484 217 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 ADRB1P08588 477 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 RPS17P08708 135 aaKnown RBP8.9□□□□□ -0.98
ZNF548-206ENST00000597047 EPORP19235 508 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 HMOX2P30519 316 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 RPS15AP62244 130 aaKnown RBP8.9□□□□□ -0.98
ZNF548-206ENST00000597047 PPP2R2AP63151 447 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 NFKB2Q00653 900 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 EIF3IQ13347 325 aaKnown RBP8.9□□□□□ -0.98
ZNF548-206ENST00000597047 LAPTM5Q13571 262 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 SLC9A5Q14940 896 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 HKDC1Q2TB90 917 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 PAGE2BQ5JRK9 111 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 TOR1AIP1Q5JTV8 583 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 PRAMEF9Q5VWM5 478 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 ATG9BQ674R7 924 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 ZNF425Q6IV72 752 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 MED27Q6P2C8 311 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 TMIGD1Q6UXZ0 262 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 CEACAM20Q6UY09 585 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 TTLL10Q6ZVT0 673 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 SYVN1Q86TM6 617 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 KLHDC8AQ8IYD2 350 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 CARFQ8N187 725 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 RNF175Q8N4F7 328 aa8.9□□□□□ -0.98
ZNF548-206ENST00000597047 CSNK1A1LQ8N752 337 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms