RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 ADGRD1Q6QNK2 874 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 RNF44Q7L0R7 432 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 ISCA2Q86U28 154 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 CENPLQ8N0S6 344 aaPredicted RBP10.6□□□□□ -0.71
LIG1-211ENST00000596457 PLD6Q8N2A8 252 aaKnown RBP10.6□□□□□ -0.71
LIG1-211ENST00000596457 SLC39A7Q92504 469 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 CABS1Q96KC9 395 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 OR4K3Q96R72 315 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 MACROD1Q9BQ69 325 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 EFHD1Q9BUP0 239 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 EPB41L4BQ9H329 900 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 CUTCQ9NTM9 273 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 ZNF358Q9NW07 568 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 CPSF2Q9P2I0 782 aaKnown RBP10.6□□□□□ -0.71
LIG1-211ENST00000596457 ZNF180Q9UJW8 692 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 PCDHGA4Q9Y5G9 962 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 HEATR5BQ9P2D3 2071 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 SPTBP11277 2137 aa10.6□□□□□ -0.71
LIG1-211ENST00000596457 PTPRQQ9UMZ3 2332 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 CCDC88CQ9P219 2028 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 IQANK1A0A1B0GTG1 560 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 TLDC2A0PJX2 215 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 HYKKA2RU49 373 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 ZNF891A8MT65 544 aaPredicted RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 H3BMH7 237 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 CLGNO14967 610 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 NKX2-8O15522 239 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 TAPBPO15533 448 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 OR1F1O43749 312 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 LCMT2O60294 686 aaKnown RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 EZRP15311 586 aaKnown RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 HRH2P25021 359 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 RORAP35398 523 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 SLC26A3P40879 764 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 SLCO1A2P46721 670 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 CCR8P51685 355 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 CSNK1G2P78368 415 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 DCDP81605 110 aaKnown RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 ERV3-1Q14264 604 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 NAA30Q147X3 362 aaPredicted RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 RBBP5Q15291 538 aaKnown RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 HKDC1Q2TB90 917 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 FAM214AQ32MH5 1076 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 ATP1A1-AS1Q5TC04 95 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 FAM69BQ5VUD6 431 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 RHBDD2Q6NTF9 364 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 TMPRSS11BQ86T26 416 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 TCAIMQ8N3R3 496 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 DTWD1Q8N5C7 304 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 CSNK1A1LQ8N752 337 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 ENDOVQ8N8Q3 282 aaKnown RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 SLC5A11Q8WWX8 675 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.59□□□□□ -0.71
LIG1-211ENST00000596457 STARD8Q92502 1023 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 NEIL2Q969S2 332 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 TMEM79Q9BSE2 394 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 YIPF2Q9BWQ6 316 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 PARD6BQ9BYG5 372 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 SYNPO2LQ9H987 977 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 CNOT10Q9H9A5 744 aaKnown RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 DNAJC11Q9NVH1 559 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 NUDT4Q9NZJ9 180 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 IFT80Q9P2H3 777 aaPredicted RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 PSMC3IPQ9P2W1 217 aaPredicted RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 KCND3Q9UK17 655 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 SRPK3Q9UPE1 567 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 FARSAQ9Y285 508 aaKnown RBP10.59□□□□□ -0.71
LIG1-211ENST00000596457 KLK4Q9Y5K2 254 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 KCNE2Q9Y6J6 123 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 MAU2Q9Y6X3 613 aa10.59□□□□□ -0.71
LIG1-211ENST00000596457 CDC14CA4D256 554 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 FOXO6A8MYZ6 492 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 C9J4A7 227 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 GOLGA8RI6L899 631 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 DSCR3O14972 297 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 KERAO60938 352 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 H2AFYO75367 372 aaKnown RBP10.58□□□□□ -0.72
LIG1-211ENST00000596457 STK16O75716 305 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 GFAPP14136 432 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 VARSP26640 1264 aaKnown RBP10.58□□□□□ -0.72
LIG1-211ENST00000596457 HSD17B3P37058 310 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 BCL6P41182 706 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 OR1D4P47884 311 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 AGTR2P50052 363 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 RPS15AP62244 130 aaKnown RBP10.58□□□□□ -0.72
LIG1-211ENST00000596457 ACAP2Q15057 778 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 PFKFB4Q16877 469 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 CCDC91Q7Z6B0 441 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 TBC1D19Q8N5T2 526 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 ZNF740Q8NDX6 193 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 OR2W6PQ8NHA6 318 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 SLC45A3Q96JT2 553 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 LRFN5Q96NI6 719 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 OR2A5Q96R48 311 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 ATOH8Q96SQ7 321 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 DHRS4Q9BTZ2 278 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 NLNQ9BYT8 704 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 SPNS1Q9H2V7 528 aa10.58□□□□□ -0.72
LIG1-211ENST00000596457 ACTL8Q9H568 366 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms