RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SCTRP47872 440 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 PPM1FP49593 454 aaPredicted RBP10.11□□□□□ -0.79
LIG1-210ENST00000596332 MAPK10P53779 464 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 CDH13P55290 713 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 WDR4P57081 412 aaKnown RBP10.11□□□□□ -0.79
LIG1-210ENST00000596332 DNAJB13P59910 316 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 ARF3P61204 181 aaPredicted RBP10.11□□□□□ -0.79
LIG1-210ENST00000596332 REEP5Q00765 189 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 CYP4F3Q08477 520 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 TUBB3Q13509 450 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 IL11RAQ14626 422 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 TBCCQ15814 346 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 PDK4Q16654 411 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 CCDC153Q494R4 210 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.11□□□□□ -0.79
LIG1-210ENST00000596332 AGBL2Q5U5Z8 902 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 ATG9BQ674R7 924 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 ZNF517Q6ZMY9 492 aaPredicted RBP10.11□□□□□ -0.79
LIG1-210ENST00000596332 DTX1Q86Y01 620 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 C10orf107Q8IVU9 208 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 LSMEM2Q8N112 164 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 TEX9Q8N6V9 391 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 L3MBTL4Q8NA19 623 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 ARMC2Q8NEN0 867 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 OR52B6Q8NGF0 335 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 MDM1Q8TC05 714 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 CREB3L4Q8TEY5 395 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 FAM111AQ96PZ2 611 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 MACROD1Q9BQ69 325 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 MECRQ9BV79 373 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 DDA1Q9BW61 102 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 EHD1Q9H4M9 534 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 PELI2Q9HAT8 420 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 STARD5Q9NSY2 213 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 SENP1Q9P0U3 644 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 ANGPTL2Q9UKU9 493 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 PLCL2Q9UPR0 1127 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 MRPS2Q9Y399 296 aaKnown RBP10.11□□□□□ -0.79
LIG1-210ENST00000596332 TMEM184BQ9Y519 407 aaPredicted RBP10.11□□□□□ -0.79
LIG1-210ENST00000596332 PCDHGA7Q9Y5G6 932 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 PCDHGA4Q9Y5G9 962 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 KCNE2Q9Y6J6 123 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 HEATR5BQ9P2D3 2071 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 CHD8Q9HCK8 2581 aa10.11□□□□□ -0.79
LIG1-210ENST00000596332 TEX51A0A1B0GUA7 166 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 TMEM150CB9EJG8 249 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 C4orf51C9J302 202 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 TERTO14746 1132 aaKnown RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 POLR1CO15160 346 aaPredicted RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 SRPX2O60687 465 aaPredicted RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 ONECUT2O95948 504 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 CAPN1P07384 714 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 MYZAPP0CAP1 466 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 CPA3P15088 417 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 EZRP15311 586 aaKnown RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 GNAZP19086 355 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 HRH2P25021 359 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 RORAP35398 523 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 MLLT3P42568 568 aaPredicted RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 CCR8P51685 355 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 ERVPABLB-1P60509 514 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 MAGOHP61326 146 aaKnown RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 HERVK_113P63132 956 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 ACY1Q03154 408 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 FOXM1Q08050 763 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 CHIT1Q13231 466 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 GTF2H2Q13888 395 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 HKDC1Q2TB90 917 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 WASHC2DQ5SRD0 308 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 THEMIS2Q5TEJ8 643 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 GTF2H2CQ6P1K8 395 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 FOXR1Q6PIV2 292 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 CROCCP2Q86T23 111 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 ZFAND4Q86XD8 727 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 MFSD9Q8NBP5 474 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 RDH11Q8TC12 318 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 C10orf90Q96M02 699 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 ZFYVE21Q9BQ24 234 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 NTMT1Q9BV86 223 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 GATA5Q9BWX5 397 aaPredicted RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 ERVK-6Q9BXR3 956 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 NT5DC2Q9H857 520 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 NOL11Q9H8H0 719 aaKnown RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 IPPKQ9H8X2 491 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 CNOT10Q9H9A5 744 aaKnown RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 SLC22A11Q9NSA0 550 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 SOHLH2Q9NX45 425 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 OPTCQ9UBM4 332 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 TMCO1Q9UM00 188 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 RNF11Q9Y3C5 154 aa10.1□□□□□ -0.79
LIG1-210ENST00000596332 TNPO3Q9Y5L0 923 aaKnown RBP10.1□□□□□ -0.79
LIG1-210ENST00000596332 SPTBP11277 2137 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 TRBC2A0A5B9 178 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 EFSO43281 561 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 ZNF749O43361 778 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 FOXS1O43638 330 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 DNAJB6O75190 326 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 SMIM24O75264 130 aa10.09□□□□□ -0.79
LIG1-210ENST00000596332 CCNDBP1O95273 360 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms