RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 SKIV2L2P42285 1042 aaKnown RBP17.07■□□□□ 0.32
HOMER3-208ENST00000595756 MRPL49Q13405 166 aaKnown RBP17.07■□□□□ 0.32
HOMER3-208ENST00000595756 PRTGQ2VWP7 1150 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 IRAK1BP1Q5VVH5 260 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 TRMT10BQ6PF06 316 aaKnown RBP17.07■□□□□ 0.32
HOMER3-208ENST00000595756 KIRREL2Q6UWL6 708 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 IGFL2Q6UWQ7 119 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 OR4N4Q8N0Y3 316 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 DTWD1Q8N5C7 304 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 C19orf60Q96EN9 201 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 MVB12AQ96EY5 273 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 PLCD4Q9BRC7 762 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 DPH7Q9BTV6 452 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 CRB3Q9BUF7 120 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 ZBTB20Q9HC78 741 aaPredicted RBP17.07■□□□□ 0.32
HOMER3-208ENST00000595756 MRPS30Q9NP92 439 aaKnown RBP17.07■□□□□ 0.32
HOMER3-208ENST00000595756 TXNDC16Q9P2K2 825 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 GALPQ9UBC7 116 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 ZNF282Q9UDV7 671 aaPredicted RBP17.07■□□□□ 0.32
HOMER3-208ENST00000595756 MAU2Q9Y6X3 613 aa17.07■□□□□ 0.32
HOMER3-208ENST00000595756 IGLV3-12A0A075B6K2 115 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 TCRBV9S1A1TA0A576 114 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 SEMA7AO75326 666 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 ALOX12BO75342 701 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 AHSGP02765 367 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 PNLIPRP1P54315 467 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 MPP1Q00013 466 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 OCA2Q04671 838 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 CRB2Q5IJ48 1285 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 AGAP7PQ5VUJ5 663 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 CAPN12Q6ZSI9 719 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 SHISA6Q6ZSJ9 500 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 CUZD1Q86UP6 607 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 PAQR7Q86WK9 346 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 OR11G2Q8NGC1 345 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 GIMAP7Q8NHV1 300 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 STT3BQ8TCJ2 826 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 AGAP4Q96P64 663 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 BARD1Q99728 777 aaKnown RBP17.06■□□□□ 0.32
HOMER3-208ENST00000595756 ACAT2Q9BWD1 397 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 LHPPQ9H008 270 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 ASF1BQ9NVP2 202 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 MED16Q9Y2X0 877 aa17.06■□□□□ 0.32
HOMER3-208ENST00000595756 IGKV1-8A0A0C4DH67 115 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 PRPF4O43172 522 aaKnown RBP eCLIP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 EIF2S1P05198 315 aaKnown RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 ZGLP1P0C6A0 271 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 MPC1LP0DKB6 136 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 ENO3P13929 434 aaPredicted RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 EZRP15311 586 aaKnown RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 FBLP22087 321 aaKnown RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 ECHS1P30084 290 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 GPX6P59796 221 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 YBX1P67809 324 aaKnown RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 KLC1Q07866 573 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 NAB1Q13506 487 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 DSG2Q14126 1118 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 NR6A1Q15406 480 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 ICE2Q659A1 982 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 ZNF425Q6IV72 752 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 SUSD1Q6UWL2 747 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 CISD2Q8N5K1 135 aaKnown RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 MIEF2Q96C03 454 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 CABS1Q96KC9 395 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 PKP4Q99569 1192 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 SLC30A3Q99726 388 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 AARSD1Q9BTE6 412 aaKnown RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 UTP6Q9NYH9 597 aaKnown RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 TAS2R13Q9NYV9 303 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 PLEKHB1Q9UF11 243 aaPredicted RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 TAC3Q9UHF0 121 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 NFU1Q9UMS0 254 aa17.05■□□□□ 0.32
HOMER3-208ENST00000595756 NOVA2Q9UNW9 492 aaKnown RBP17.05■□□□□ 0.32
HOMER3-208ENST00000595756 FAM159BA6NKW6 160 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 H0YGG7 62 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 EIF3FO00303 357 aaPredicted RBP17.04■□□□□ 0.32
HOMER3-208ENST00000595756 MAP2K7O14733 419 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 CBX6O95503 412 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 DDAH2O95865 285 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 SLC16A8O95907 504 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 HPP00738 406 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 ACPPP15309 386 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 TNFRSF8P28908 595 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 ARF3P61204 181 aaPredicted RBP17.04■□□□□ 0.32
HOMER3-208ENST00000595756 ABATP80404 500 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 RELAQ04206 551 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 PRDX1Q06830 199 aaKnown RBP17.04■□□□□ 0.32
HOMER3-208ENST00000595756 EIF2S3LQ2VIR3 472 aaKnown RBP17.04■□□□□ 0.32
HOMER3-208ENST00000595756 GARNL3Q5VVW2 1013 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 LRRC8EQ6NSJ5 796 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 FAM45BPQ6NSW5 357 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 FBXO42Q6P3S6 717 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 ZNF549Q6P9A3 640 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 STRA8Q7Z7C7 330 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 CSNK1A1LQ8N752 337 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 LRRN4CLQ8ND94 238 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 FAM45AQ8TCE6 357 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 ZNF480Q8WV37 535 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 CPNE1Q99829 537 aa17.04■□□□□ 0.32
HOMER3-208ENST00000595756 EPS8L2Q9H6S3 715 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms