RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 GLRBP48167 497 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 MC1RQ01726 317 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 CDC16Q13042 620 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 PRTGQ2VWP7 1150 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 TECRLQ5HYJ1 363 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 GARNL3Q5VVW2 1013 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 ZNF385CQ66K41 422 aaPredicted RBP24.62■■□□□ 1.53
TRIM28-204ENST00000594806 PLD6Q8N2A8 252 aaKnown RBP24.62■■□□□ 1.53
TRIM28-204ENST00000594806 MREGQ8N565 214 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 UBTD2Q8WUN7 234 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 EXT2Q93063 718 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 CD244Q9BZW8 370 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 CUTCQ9NTM9 273 aa24.62■■□□□ 1.53
TRIM28-204ENST00000594806 HYKKA2RU49 373 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 UBXN8O00124 270 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 TERTO14746 1132 aaKnown RBP24.61■■□□□ 1.53
TRIM28-204ENST00000594806 DSCR3O14972 297 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 EFSO43281 561 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 KLK8O60259 260 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 RECKO95980 971 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 CTSBP07858 339 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 RAB40ALP0C0E4 278 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 PIM1P11309 404 aaPredicted RBP24.61■■□□□ 1.53
TRIM28-204ENST00000594806 MTHFD2P13995 350 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 CXCR2P25025 360 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 GDF5P43026 501 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 DCDP81605 110 aaKnown RBP24.61■■□□□ 1.53
TRIM28-204ENST00000594806 MUM1Q2TAK8 710 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 CRTC2Q53ET0 693 aaPredicted RBP24.61■■□□□ 1.53
TRIM28-204ENST00000594806 METTL2BQ6P1Q9 378 aaKnown RBP24.61■■□□□ 1.53
TRIM28-204ENST00000594806 NXPE4Q6UWF7 544 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 LRRC70Q7Z2Q7 622 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 CSNK1A1LQ8N752 337 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 CT55Q8WUE5 264 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 GBP5Q96PP8 586 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 MRPL57Q9BQC6 102 aaKnown RBP24.61■■□□□ 1.53
TRIM28-204ENST00000594806 AIF1LQ9BQI0 150 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 PRORYQ9H606 182 aa24.61■■□□□ 1.53
TRIM28-204ENST00000594806 A0A1B0GX78 115 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 TRBC2A0A5B9 178 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 H2AFYO75367 372 aaKnown RBP24.6■■□□□ 1.53
TRIM28-204ENST00000594806 ONECUT2O95948 504 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 EIF2S1P05198 315 aaKnown RBP24.6■■□□□ 1.53
TRIM28-204ENST00000594806 HSPA7P48741 367 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 ALDH18A1P54886 795 aaKnown RBP24.6■■□□□ 1.53
TRIM28-204ENST00000594806 RPS15P62841 145 aaKnown RBP24.6■■□□□ 1.53
TRIM28-204ENST00000594806 DNASE1L3Q13609 305 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 RIBC1Q8N443 379 aaPredicted RBP24.6■■□□□ 1.53
TRIM28-204ENST00000594806 MFSD9Q8NBP5 474 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 ROPN1BQ9BZX4 212 aaPredicted RBP24.6■■□□□ 1.53
TRIM28-204ENST00000594806 PITHD1Q9GZP4 211 aaPredicted RBP24.6■■□□□ 1.53
TRIM28-204ENST00000594806 CHST8Q9H2A9 424 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 EHD1Q9H4M9 534 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 ROPN1Q9HAT0 212 aaPredicted RBP24.6■■□□□ 1.53
TRIM28-204ENST00000594806 TBK1Q9UHD2 729 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 PCDHGA4Q9Y5G9 962 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 TNPO3Q9Y5L0 923 aaKnown RBP24.6■■□□□ 1.53
TRIM28-204ENST00000594806 FER1L5A0AVI2 2057 aa24.6■■□□□ 1.53
TRIM28-204ENST00000594806 ZNF891A8MT65 544 aaPredicted RBP24.59■■□□□ 1.53
TRIM28-204ENST00000594806 C9J4A7 227 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 CLGNO14967 610 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 GSTA1P08263 222 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 GFAPP14136 432 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 CXADRP78310 365 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 COL28A1Q2UY09 1125 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 C18orf21Q32NC0 220 aaPredicted RBP24.59■■□□□ 1.53
TRIM28-204ENST00000594806 CATSPEREQ5SY80 951 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 ATG9BQ674R7 924 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 PRMT9Q6P2P2 845 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 C19orf48Q6RUI8 117 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 TTLL10Q6ZVT0 673 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 CAMKVQ8NCB2 501 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 MZB1Q8WU39 189 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 RNF31Q96EP0 1072 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 MVB12AQ96EY5 273 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 SCYL1Q96KG9 808 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 MRPL46Q9H2W6 279 aaKnown RBP24.59■■□□□ 1.53
TRIM28-204ENST00000594806 AKIRIN1Q9H9L7 192 aaPredicted RBP24.59■■□□□ 1.53
TRIM28-204ENST00000594806 CPNE5Q9HCH3 593 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 STARD5Q9NSY2 213 aa24.59■■□□□ 1.53
TRIM28-204ENST00000594806 DHCR7Q9UBM7 475 aaKnown RBP24.59■■□□□ 1.53
TRIM28-204ENST00000594806 C1GALT1C1LP0DN25 315 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 ALAS2P22557 587 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 AHRP35869 848 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 REEP5Q00765 189 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 SRSF6Q13247 344 aaKnown RBP24.58■■□□□ 1.53
TRIM28-204ENST00000594806 SETDB1Q15047 1291 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 PDK4Q16654 411 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 NDUFA9Q16795 377 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 GPR155Q7Z3F1 870 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 TMPRSS11BQ86T26 416 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 PLD3Q8IV08 490 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 TM4SF19Q96DZ7 209 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 ZNF358Q9NW07 568 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 OPTCQ9UBM4 332 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 DCDC2Q9UHG0 476 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 CDC14AQ9UNH5 594 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 FARSAQ9Y285 508 aaKnown RBP24.58■■□□□ 1.53
TRIM28-204ENST00000594806 CELSR3Q9NYQ7 3312 aa24.58■■□□□ 1.53
TRIM28-204ENST00000594806 K7EPI3 171 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms