RNA–Protein interactions for RNA: ENST00000590924.5

VAT1-208, Transcript of vesicle amine transport 1, humanhuman

TSL 3

Gene VAT1, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-208ENST00000590924 JMJD6Q6NYC1 403 aaPredicted RBP17.2■□□□□ 0.34
VAT1-208ENST00000590924 TLDC1Q6P9B6 456 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 MRGPREQ86SM8 312 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 TBC1D1Q86TI0 1168 aaPredicted RBP17.2■□□□□ 0.34
VAT1-208ENST00000590924 RIBC1Q8N443 379 aaPredicted RBP17.2■□□□□ 0.34
VAT1-208ENST00000590924 DNAJC22Q8N4W6 341 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 OR9A1PQ8NGU1 263 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 HMGCLL1Q8TB92 370 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 ANKRD49Q8WVL7 239 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 CABS1Q96KC9 395 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 TRIM54Q9BYV2 358 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 SPRTNQ9H040 489 aaPredicted RBP17.2■□□□□ 0.34
VAT1-208ENST00000590924 SPATA7Q9P0W8 599 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 PLAGL1Q9UM63 463 aa17.2■□□□□ 0.34
VAT1-208ENST00000590924 ARHGEF33A8MVX0 844 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 ISM1B1AKI9 464 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 RASGRF2O14827 1237 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 GNLYP22749 145 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 OTX2P32243 289 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 RAB28P51157 221 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 PGGT1BP53609 377 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 DCDP81605 110 aaKnown RBP17.19■□□□□ 0.34
VAT1-208ENST00000590924 IFFO1Q0D2I5 559 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 BEND6Q5SZJ8 279 aaPredicted RBP17.19■□□□□ 0.34
VAT1-208ENST00000590924 MLIPQ5VWP3 458 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 CMC1Q7Z7K0 106 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 IQCKQ8N0W5 287 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 Q8NA96 180 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 ACMSDQ8TDX5 336 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 CCDC138Q96M89 665 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 MENTQ9BUN1 341 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 NMRAL1Q9HBL8 299 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 TXLNGQ9NUQ3 528 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 EURLQ9NYK6 297 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 C5AR2Q9P296 337 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 CTNNAL1Q9UBT7 734 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 GPN3Q9UHW5 284 aaPredicted RBP17.19■□□□□ 0.34
VAT1-208ENST00000590924 PLCL2Q9UPR0 1127 aa17.19■□□□□ 0.34
VAT1-208ENST00000590924 RUVBL2Q9Y230 463 aaKnown RBP17.19■□□□□ 0.34
VAT1-208ENST00000590924 PTRH2Q9Y3E5 179 aaKnown RBP17.19■□□□□ 0.34
VAT1-208ENST00000590924 A0A096LPK6 155 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 BLACEA4D250 179 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 A6NL46 340 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 ZNF839A8K0R7 811 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 CTSBP07858 339 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 LTA4HP09960 611 aaKnown RBP17.18■□□□□ 0.34
VAT1-208ENST00000590924 HIST1H2AGP0C0S8 130 aaPredicted RBP17.18■□□□□ 0.34
VAT1-208ENST00000590924 HIST1H2ADP20671 130 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 FOLR3P41439 243 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 AP1S2P56377 157 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 CYP2A13Q16696 494 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 FAM83EQ2M2I3 478 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 VWA5B1Q5TIE3 1220 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 C1orf189Q5VU69 101 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 SLC6A19Q695T7 634 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 CROCCP2Q86T23 111 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 ADAMTSL2Q86TH1 951 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 LCA5Q86VQ0 697 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 ZNF655Q8N720 491 aaPredicted RBP17.18■□□□□ 0.34
VAT1-208ENST00000590924 RBMXL3Q8N7X1 1067 aaKnown RBP17.18■□□□□ 0.34
VAT1-208ENST00000590924 LINC01555Q8NAE3 123 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 OR2Y1Q8NGV0 311 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 OR2L8Q8NGY9 312 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 DLG3Q92796 817 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 PNPLA2Q96AD5 504 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 HIST1H2AHQ96KK5 128 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 FER1L6-AS2Q96M78 137 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 HIST1H2AJQ99878 128 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 H2AFJQ9BTM1 129 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 IFT80Q9P2H3 777 aaPredicted RBP17.18■□□□□ 0.34
VAT1-208ENST00000590924 DHCR7Q9UBM7 475 aaKnown RBP17.18■□□□□ 0.34
VAT1-208ENST00000590924 NDOR1Q9UHB4 597 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 TSR3Q9UJK0 312 aaKnown RBP17.18■□□□□ 0.34
VAT1-208ENST00000590924 PDE10AQ9Y233 779 aa17.18■□□□□ 0.34
VAT1-208ENST00000590924 KLHL2O95198 593 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 IGHEP01854 428 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 ERGP11308 486 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 CD1DP15813 335 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 MAGP20916 626 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 VARSP26640 1264 aaKnown RBP17.17■□□□□ 0.34
VAT1-208ENST00000590924 BDKRB1P46663 353 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 GCGRP47871 477 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 CDKL1Q00532 357 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 INPP5JQ15735 1006 aaPredicted RBP17.17■□□□□ 0.34
VAT1-208ENST00000590924 NKAIN1Q4KMZ8 207 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.17■□□□□ 0.34
VAT1-208ENST00000590924 CDKL4Q5MAI5 379 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 MRPL14Q6P1L8 145 aaKnown RBP17.17■□□□□ 0.34
VAT1-208ENST00000590924 KIAA1191Q96A73 305 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 SLC22A18Q96BI1 424 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 PKP4Q99569 1192 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 NDC1Q9BTX1 674 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 SLAMF7Q9NQ25 335 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 ARGLU1Q9NWB6 273 aaPredicted RBP17.17■□□□□ 0.34
VAT1-208ENST00000590924 ADAMTS6Q9UKP5 1117 aa17.17■□□□□ 0.34
VAT1-208ENST00000590924 PABPN1LA6NDY0 278 aaKnown RBP17.16■□□□□ 0.34
VAT1-208ENST00000590924 PEX12O00623 359 aa17.16■□□□□ 0.34
VAT1-208ENST00000590924 CNOT3O75175 753 aaKnown RBP17.16■□□□□ 0.34
VAT1-208ENST00000590924 CSHL1Q14406 222 aa17.16■□□□□ 0.34
VAT1-208ENST00000590924 SLC9A5Q14940 896 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms