RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZNF534Q76KX8 674 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 SPNS2Q8IVW8 549 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 KATNAL2Q8IYT4 538 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 CHDHQ8NE62 594 aaPredicted RBP12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 OR13J1Q8NGT2 312 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 OR9A4Q8NGU2 314 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 LILRB4Q8NHJ6 448 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 CCDC42Q96M95 316 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 ZNF778Q96MU6 729 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 OR2A5Q96R48 311 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 CYTH2Q99418 400 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 NHEJ1Q9H9Q4 299 aaPredicted RBP12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 GNPTGQ9UJJ9 305 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 TTC7AQ9ULT0 858 aaPredicted RBP12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 CDC14AQ9UNH5 594 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 ALG6Q9Y672 507 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 SCN3AQ9NY46 2000 aa12.04□□□□□ -0.48
PRKCSH-210ENST00000589990 MLYCDO95822 493 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 GOT2P00505 430 aaKnown RBP12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 RPN2P04844 631 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 ANXA5P08758 320 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 HOXD4P09016 255 aaPredicted RBP12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 RBP3P10745 1247 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 AOAHP28039 575 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 EIF3EP60228 445 aaKnown RBP12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 MEP1AQ16819 746 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 MINDY4Q4G0A6 757 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 EMC4Q5J8M3 183 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 MFSD4BQ5TF39 518 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 SLC25A25Q6KCM7 469 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 ANKRD37Q7Z713 158 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 PAQR7Q86WK9 346 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 PLD3Q8IV08 490 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 RHOT2Q8IXI1 618 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 KIF2BQ8N4N8 673 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 TMEM178AQ8NBL3 297 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 HMGCLL1Q8TB92 370 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 FAM57AQ8TBR7 257 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 ASZ1Q8WWH4 475 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 MVB12AQ96EY5 273 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 DRC3Q9H069 523 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 DNAJB12Q9NXW2 375 aaKnown RBP12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 KCNN3Q9UGI6 736 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 ST6GALNAC2Q9UJ37 374 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 TFR2Q9UP52 801 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 PLEKHA6Q9Y2H5 1048 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 COL6A5A8TX70 2615 aa12.03□□□□□ -0.48
PRKCSH-210ENST00000589990 DNAJC13O75165 2243 aa12.02□□□□□ -0.48
PRKCSH-210ENST00000589990 ZNF407Q9C0G0 2248 aa12.02□□□□□ -0.48
PRKCSH-210ENST00000589990 KIAA1324LA8MWY0 1029 aaPredicted RBP12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 FOXO6A8MYZ6 492 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 SLC25A12O75746 678 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 ZWINTO95229 277 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 FKBP9O95302 570 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 PTGS2P35354 604 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 EMP3P54852 163 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 DLX5P56178 289 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 AP2B1P63010 937 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 ADAM8P78325 824 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 FOLH1Q04609 750 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 CES4AQ5XG92 561 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 AADACL2Q6P093 401 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 DARS2Q6PI48 645 aaKnown RBP12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 PRIMA1Q86XR5 153 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 CDKL3Q8IVW4 592 aaPredicted RBP12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 RCOR2Q8IZ40 523 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 METTL21AQ8WXB1 218 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 ANP32BQ92688 251 aaKnown RBP12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 RAD51AP1Q96B01 352 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 SEC16BQ96JE7 1060 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 CCDC138Q96M89 665 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 PWWP2AQ96N64 755 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 PANX2Q96RD6 677 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 MACROD1Q9BQ69 325 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 PLCD4Q9BRC7 762 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 CARD6Q9BX69 1037 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 RAB11FIP5Q9BXF6 653 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 CDCP1Q9H5V8 836 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 KCNJ16Q9NPI9 418 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 HCN3Q9P1Z3 774 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 LRFN1Q9P244 771 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 MARCH4Q9P2E8 410 aaPredicted RBP12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 FEZ2Q9UHY8 353 aaPredicted RBP12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 FBN1P35555 2871 aaKnown RBP12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 STAB1Q9NY15 2570 aa12.02□□□□□ -0.49
PRKCSH-210ENST00000589990 SOWAHDA6NJG2 315 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 PRPF4O43172 522 aaKnown RBP eCLIP12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 PROM1O43490 865 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 HS6ST1O60243 411 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 NME2P1O60361 137 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 CDC40O60508 579 aaKnown RBP eCLIP12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 CTAG2O75638 210 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 APOA4P06727 396 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 NME2P22392 152 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 CHRNB4P30926 498 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 NUP107P57740 925 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 PMPCAQ10713 525 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 CCDC181Q5TID7 509 aa12.01□□□□□ -0.49
PRKCSH-210ENST00000589990 TMEM198Q66K66 360 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms