RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SRPK3Q9UPE1 567 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 PDE10AQ9Y233 779 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 PCDHGA6Q9Y5G7 932 aa9.94□□□□□ -0.82
SDF2-208ENST00000589788 MRPS18BQ9Y676 258 aaKnown RBP9.94□□□□□ -0.82
SDF2-208ENST00000589788 FAM159BA6NKW6 160 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 C9J4A7 227 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 E7ENX8 843 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 NKX2-8O15522 239 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 FBXO24O75426 580 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 TSPAN12O95859 305 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 ZNF37AP17032 561 aaPredicted RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 IMPA1P29218 277 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 RORAP35398 523 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 GP5P40197 560 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 MAP2K3P46734 347 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 PGGT1BP53609 377 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 TAS2R39P59534 338 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 ABATP80404 500 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 POU4F1Q01851 419 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 TAP2Q03519 686 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 PRDX1Q06830 199 aaKnown RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 USP10Q14694 798 aaKnown RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 PTCHD3Q3KNS1 767 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 KBTBD12Q3ZCT8 623 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 TCTE1Q5JU00 501 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 BEND6Q5SZJ8 279 aaPredicted RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 ICE2Q659A1 982 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 RHBDD2Q6NTF9 364 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 ADCK2Q7Z695 626 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 MREGQ8N565 214 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 PPM1NQ8N819 430 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 TTC29Q8NA56 475 aaPredicted RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 LSM14AQ8ND56 463 aaKnown RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 ANKRD7Q92527 254 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 TTC9Q92623 222 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 DLG3Q92796 817 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 EXTL1Q92935 676 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 MED8Q96G25 268 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 WBP1Q96G27 269 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 PCBD2Q9H0N5 130 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 CHST8Q9H2A9 424 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 ACTL8Q9H568 366 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 AKIRIN1Q9H9L7 192 aaPredicted RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 LRRC4CQ9HCJ2 640 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 SRA1Q9HD15 236 aaKnown RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 SLC6A20Q9NP91 592 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 PCMTD2Q9NV79 361 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 ARL15Q9NXU5 204 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 STOX2Q9P2F5 926 aaPredicted RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 ANKMY1Q9P2S6 941 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 SNX7Q9UNH6 387 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 MTO1Q9Y2Z2 717 aaKnown RBP9.93□□□□□ -0.82
SDF2-208ENST00000589788 KLK4Q9Y5K2 254 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 WDFY3Q8IZQ1 3526 aa9.93□□□□□ -0.82
SDF2-208ENST00000589788 A0A0J9YVX5 310 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 TERTO14746 1132 aaKnown RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 SRPX2O60687 465 aaPredicted RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 CTSVO60911 334 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 CREG1O75629 220 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 ENO2P09104 434 aaPredicted RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 ALAS2P22557 587 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 CCND1P24385 295 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 PTPN4P29074 926 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 PHBP35232 272 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 SPRP35270 261 aaPredicted RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 PMS2P54278 862 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 ARSFP54793 590 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 AP1S2P56377 157 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 VSX2P58304 361 aaPredicted RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 TBPL1P62380 186 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 YBX1P67809 324 aaKnown RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 NAB1Q13506 487 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 ERV3-1Q14264 604 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 ZNF460Q14592 562 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 GRM7Q14831 915 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 TBR1Q16650 682 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 PHKG1Q16816 387 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 SOWAHCQ53LP3 525 aaPredicted RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 GRTP1Q5TC63 336 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 C1orf189Q5VU69 101 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 YOD1Q5VVQ6 348 aaPredicted RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 PRAMEF13Q5VWM6 474 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 BORAQ6PGQ7 559 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 AGTRAPQ6RW13 159 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 MBOAT1Q6ZNC8 495 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 TRMT10CQ7L0Y3 403 aaKnown RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 CEP97Q8IW35 865 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 PROKR1Q8TCW9 393 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 ATL1Q8WXF7 558 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 PDLIM5Q96HC4 596 aaKnown RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 RBBP8Q99708 897 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 ZFYVE21Q9BQ24 234 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 C17orf62Q9BQA9 187 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 PLCD4Q9BRC7 762 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 ATG10Q9H0Y0 220 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 ACBD3Q9H3P7 528 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 CDC42EP4Q9H3Q1 356 aaKnown RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 POPDC3Q9HBV1 291 aa9.92□□□□□ -0.82
SDF2-208ENST00000589788 DHCR7Q9UBM7 475 aaKnown RBP9.92□□□□□ -0.82
SDF2-208ENST00000589788 NDOR1Q9UHB4 597 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms