RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 PLAG1Q6DJT9 500 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 FAAH2Q6GMR7 532 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 H3F3CQ6NXT2 135 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 PCGF5Q86SE9 256 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 PRUNE1Q86TP1 453 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 THAP3Q8WTV1 239 aaPredicted RBP13.25□□□□□ -0.29
VMP1-209ENST00000588915 MFSD3Q96ES6 412 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 CYTH2Q99418 400 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 PKP4Q99569 1192 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 TSGA10Q9BZW7 698 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 TAC3Q9UHF0 121 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 SOX13Q9UN79 622 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 CAPN6Q9Y6Q1 641 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 CPAMD8Q8IZJ3 1885 aa13.25□□□□□ -0.29
VMP1-209ENST00000588915 KCNE1BA0A087WTH5 132 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 A0A0A6YYC8 382 aaPredicted RBP13.24□□□□□ -0.29
VMP1-209ENST00000588915 E5RI56 91 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 I3L1I5 382 aaPredicted RBP13.24□□□□□ -0.29
VMP1-209ENST00000588915 NSA2O95478 260 aaKnown RBP13.24□□□□□ -0.29
VMP1-209ENST00000588915 SLC16A8O95907 504 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 CELA2AP08217 269 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 PAMP19021 973 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 TPSB2P20231 275 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 GRNP28799 593 aaKnown RBP13.24□□□□□ -0.29
VMP1-209ENST00000588915 AGTR2P50052 363 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 ZNF33BQ06732 778 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 PTK6Q13882 451 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 TPSAB1Q15661 275 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 ACSBG2Q5FVE4 666 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 KIAA0930Q6ICG6 404 aaPredicted RBP13.24□□□□□ -0.29
VMP1-209ENST00000588915 CPEB2Q7Z5Q1 589 aaKnown RBP13.24□□□□□ -0.29
VMP1-209ENST00000588915 TMEM139Q8IV31 216 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 MCOLN3Q8TDD5 553 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 ZNF480Q8WV37 535 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 MAIP1Q8WWC4 291 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 THAP11Q96EK4 314 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 TMEM184CQ9NVA4 438 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 INTS10Q9NVR2 710 aaKnown RBP13.24□□□□□ -0.29
VMP1-209ENST00000588915 PCYOX1Q9UHG3 505 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 CRYL1Q9Y2S2 319 aa13.24□□□□□ -0.29
VMP1-209ENST00000588915 A0A0U1RQJ8 604 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 MAGEB16A2A368 324 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 GFYI3L273 518 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 SMAPO00193 183 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 ZBTB14O43829 449 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 KIF5CO60282 957 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 F10P00742 488 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 ZSCAN5DPP0CG00 497 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 MPC1LP0DKB6 136 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 ENO3P13929 434 aaPredicted RBP13.23□□□□□ -0.29
VMP1-209ENST00000588915 COX6B1P14854 86 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 MGAT1P26572 445 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 SKIV2L2P42285 1042 aaKnown RBP13.23□□□□□ -0.29
VMP1-209ENST00000588915 SMSP52788 366 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 RIPPLY3P57055 190 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 BASP1P80723 227 aaKnown RBP13.23□□□□□ -0.29
VMP1-209ENST00000588915 SARNPP82979 210 aaKnown RBP13.23□□□□□ -0.29
VMP1-209ENST00000588915 SIX1Q15475 284 aaPredicted RBP13.23□□□□□ -0.29
VMP1-209ENST00000588915 EXT1Q16394 746 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 SYT16Q17RD7 645 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 ZNF766Q5HY98 468 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 ACER2Q5QJU3 275 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 CILP2Q8IUL8 1156 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 REXO1L1PQ8IX06 675 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 LRRC56Q8IYG6 542 aaPredicted RBP13.23□□□□□ -0.29
VMP1-209ENST00000588915 M1APQ8TC57 530 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 ASB11Q8WXH4 323 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 FAM129AQ9BZQ8 928 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 VN1R1Q9GZP7 353 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 SYNPO2LQ9H987 977 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 SYBUQ9NX95 663 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 GALPQ9UBC7 116 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 ZNF835Q9Y2P0 537 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 PDZD2O15018 2839 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 PKDREJQ9NTG1 2253 aa13.23□□□□□ -0.29
VMP1-209ENST00000588915 SCN2AQ99250 2005 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 EIF3FO00303 357 aaPredicted RBP13.22□□□□□ -0.29
VMP1-209ENST00000588915 FFAR3O14843 346 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 GPR42O15529 346 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 P2RX6O15547 441 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 TTI1O43156 1089 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 SLC19A2O60779 497 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 ESRRAP11474 423 aaPredicted RBP13.22□□□□□ -0.29
VMP1-209ENST00000588915 IL10P22301 178 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 BCL6P41182 706 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 CLCN7P51798 805 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 EFNA3P52797 238 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 RPS15AP62244 130 aaKnown RBP13.22□□□□□ -0.29
VMP1-209ENST00000588915 TSTA3Q13630 321 aaPredicted RBP13.22□□□□□ -0.29
VMP1-209ENST00000588915 RPS6KA1Q15418 735 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 MEP1AQ16819 746 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 BTBD16Q32M84 506 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 MEI1Q5TIA1 1274 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 NEPROQ6NW34 567 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 Q6ZPB1 254 aaPredicted RBP13.22□□□□□ -0.29
VMP1-209ENST00000588915 CENPUQ71F23 418 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 ADCK2Q7Z695 626 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 LURAP1Q96LR2 239 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 DESI2Q9BSY9 194 aa13.22□□□□□ -0.29
VMP1-209ENST00000588915 PCBD2Q9H0N5 130 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms