RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TMEM121BQ9BXQ6 578 aaPredicted RBP18.16■□□□□ 0.5
CLPTM1-209ENST00000588855 MID2Q9UJV3 735 aa18.16■□□□□ 0.5
CLPTM1-209ENST00000588855 LCMT2O60294 686 aaKnown RBP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 OR2B3O76000 313 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 CD22P20273 847 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 SLC5A2P31639 672 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 GRK3P35626 688 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 BCL6P41182 706 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 VSX2P58304 361 aaPredicted RBP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 RPS15AP62244 130 aaKnown RBP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 IRF8Q02556 426 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 RELAQ04206 551 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 CHIT1Q13231 466 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 COL9A2Q14055 689 aaPredicted RBP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 DOC2AQ14183 400 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 SLBPQ14493 270 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 UNC50Q53HI1 259 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 XKR6Q5GH73 641 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 TMEM164Q5U3C3 297 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 AGBL2Q5U5Z8 902 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 PWWP2BQ6NUJ5 590 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 BPHLQ86WA6 291 aaPredicted RBP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 LSMEM2Q8N112 164 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 OR8K5Q8NH50 307 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 ZNF483Q8TF39 744 aaPredicted RBP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 CCDC126Q96EE4 140 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 L3HYPDHQ96EM0 354 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 ZNF285Q96NJ3 590 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 TEFMQ96QE5 360 aaKnown RBP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 AIF1LQ9BQI0 150 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 ZPBPQ9BS86 351 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 ASPSCR1Q9BZE9 553 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 SPRTNQ9H040 489 aaPredicted RBP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 IPPKQ9H8X2 491 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 ZBTB26Q9HCK0 441 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 KCNK9Q9NPC2 374 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 STARD5Q9NSY2 213 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 IRAK4Q9NWZ3 460 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 GEMIN8Q9NWZ8 242 aaKnown RBP18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 SERTAD3Q9UJW9 196 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 PCDHGA7Q9Y5G6 932 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 PCDHGA4Q9Y5G9 962 aa18.15■□□□□ 0.5
CLPTM1-209ENST00000588855 CHD8Q9HCK8 2581 aa18.14■□□□□ 0.5
CLPTM1-209ENST00000588855 TRBC2A0A5B9 178 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 H0YGG7 62 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 OR7A17O14581 309 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 NVLO15381 856 aaKnown RBP18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 PRPF4O43172 522 aaKnown RBP eCLIP18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 SUPT7LO94864 414 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 ZNF28P17035 718 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 TSPAN8P19075 237 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 IMPDH1P20839 514 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 ETV4P43268 484 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 PIK3CGP48736 1102 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 ARF3P61204 181 aaPredicted RBP18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 MPP2Q14168 576 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 TTMPQ5BVD1 217 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 C10orf107Q8IVU9 208 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 GPR135Q8IZ08 494 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 MDM1Q8TC05 714 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 WDR34Q96EX3 536 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 PTCD3Q96EY7 689 aaKnown RBP18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 EHD1Q9H4M9 534 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 NOL11Q9H8H0 719 aaKnown RBP18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 SEMA4BQ9NPR2 832 aaPredicted RBP18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 THSD1Q9NS62 852 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 OXSMQ9NWU1 459 aa18.14■□□□□ 0.49
CLPTM1-209ENST00000588855 OR1F1O43749 312 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 SRPX2O60687 465 aaPredicted RBP18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 KATNA1O75449 491 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 SCRG1O75711 98 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 WFS1O76024 890 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 STATHP02808 62 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 EIF2S1P05198 315 aaKnown RBP18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 CDH13P55290 713 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 E2F2Q14209 437 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 VN1R4Q7Z5H5 301 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 TMEM126BQ8IUX1 230 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 OR52B6Q8NGF0 335 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 MECRQ9BV79 373 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 SARGQ9BW04 601 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 B3GNT4Q9C0J1 378 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 FER1L5A0AVI2 2057 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 ZSCAN9O15535 394 aaPredicted RBP18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 P2RX6O15547 441 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 H2AFYO75367 372 aaKnown RBP18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 KIAA0754O94854 1291 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 ALDH3A1P30838 453 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 CASP2P42575 452 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 SCTRP47872 440 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 DNAJB13P59910 316 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 CLCQ05315 142 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 PCDH1Q08174 1060 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 RBBP5Q15291 538 aaKnown RBP18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 TBCCQ15814 346 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 TBC1D25Q3MII6 688 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 TCTE1Q5JU00 501 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 WASHC2DQ5SRD0 308 aa18.13■□□□□ 0.49
CLPTM1-209ENST00000588855 LIPMQ5VYY2 423 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms