RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 IGKV1-8A0A0C4DH67 115 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 A0A1W2PP18 115 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 DYTNA2CJ06 578 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 FAM221BA6H8Z2 402 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 B4DGG1 531 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 H7BY64 318 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 BTN3A3O00478 584 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 BCAT2O15382 392 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-205ENST00000588745 RASSF9O75901 435 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 SDC1P18827 310 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 IL12AP29459 219 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 CMPK1P30085 196 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 AFF3P51826 1226 aaKnown RBP10.96□□□□□ -0.65
SMAD4-205ENST00000588745 RAP1GDS1P52306 607 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 POLR2JP52435 117 aaKnown RBP10.96□□□□□ -0.65
SMAD4-205ENST00000588745 C21orf59P57076 290 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 CSNK1G2P78368 415 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 TBL3Q12788 808 aaKnown RBP10.96□□□□□ -0.65
SMAD4-205ENST00000588745 RBBP5Q15291 538 aaKnown RBP10.96□□□□□ -0.65
SMAD4-205ENST00000588745 VPS26BQ4G0F5 336 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 TIGD2Q4W5G0 525 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 PMS2CLQ68D20 193 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 NOXRED1Q6NXP6 359 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 VN1R5Q7Z5H4 357 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 ADCK2Q7Z695 626 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 SLC9B2Q86UD5 537 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 C11orf74Q86VG3 221 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 RETREG3Q86VR2 466 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 GKN2Q86XP6 184 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 SCUBE1Q8IWY4 988 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 RBM12BQ8IXT5 1001 aaKnown RBP10.96□□□□□ -0.65
SMAD4-205ENST00000588745 ULK2Q8IYT8 1036 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 ADGRF3Q8IZF5 1079 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 DSELQ8IZU8 1212 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 FBXL6Q8N531 539 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 PCYOX1LQ8NBM8 494 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 GLB1L3Q8NCI6 653 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-205ENST00000588745 FAM13CQ8NE31 585 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 OR4E2Q8NGC2 313 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 LMX1AQ8TE12 382 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 C11orf24Q96F05 449 aaPredicted RBP10.96□□□□□ -0.65
SMAD4-205ENST00000588745 PRAP1Q96NZ9 151 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 SERPINI1Q99574 410 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 ZBTB18Q99592 522 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 THTPAQ9BU02 230 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 DPY30Q9C005 99 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 WDR41Q9HAD4 459 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 SLC6A20Q9NP91 592 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 SPASTQ9UBP0 616 aa10.96□□□□□ -0.65
SMAD4-205ENST00000588745 PRPF19Q9UMS4 504 aaKnown RBP10.96□□□□□ -0.65
SMAD4-205ENST00000588745 ARHGEF17Q96PE2 2063 aaPredicted RBP10.96□□□□□ -0.66
SMAD4-205ENST00000588745 ABCA7Q8IZY2 2146 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 SPAG17Q6Q759 2223 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 A0A088AWK7 358 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 ASPDHA6ND91 283 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 CCDC154A6NI56 674 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 A8MUI8 341 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 ISM1B1AKI9 464 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 EEDO75530 441 aaKnown RBP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 MYO1DO94832 1006 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 HRH2P25021 359 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 TIA1P31483 386 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 CSNK1EP49674 416 aaKnown RBP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 CLNS1AP54105 237 aaKnown RBP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 HNRNPKP61978 463 aaKnown RBP eCLIP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 KIR2DS3Q14952 304 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 SF1Q15637 639 aaKnown RBP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 LYSMD4Q5XG99 296 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 CYB5D1Q6P9G0 228 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 BNC2Q6ZN30 1099 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 SFTPA2Q8IWL1 248 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 C10orf67Q8IYJ2 551 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 C1orf52Q8N6N3 182 aaKnown RBP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 ANKRD53Q8N9V6 530 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 AVL9Q8NBF6 648 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 ZNF548Q8NEK5 533 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 FAM46DQ8NEK8 389 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 CLHC1Q8NHS4 586 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 CHTF18Q8WVB6 975 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 GAB3Q8WWW8 586 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 SLC22A18Q96BI1 424 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 ROPN1LQ96C74 230 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 CLPTM1LQ96KA5 538 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 EBPLQ9BY08 206 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 TMEM184CQ9NVA4 438 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 SIRT5Q9NXA8 310 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 LEF1Q9UJU2 399 aaPredicted RBP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.95□□□□□ -0.66
SMAD4-205ENST00000588745 THADAQ6YHU6 1953 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 CACNA1IQ9P0X4 2223 aa10.95□□□□□ -0.66
SMAD4-205ENST00000588745 TRBC2A0A5B9 178 aa10.94□□□□□ -0.66
SMAD4-205ENST00000588745 FEZF1A0PJY2 475 aa10.94□□□□□ -0.66
SMAD4-205ENST00000588745 TMEM221A6NGB7 291 aa10.94□□□□□ -0.66
SMAD4-205ENST00000588745 ANKDD1BA6NHY2 528 aa10.94□□□□□ -0.66
SMAD4-205ENST00000588745 M0R296 226 aa10.94□□□□□ -0.66
SMAD4-205ENST00000588745 CFLARO15519 480 aa10.94□□□□□ -0.66
SMAD4-205ENST00000588745 AQP9O43315 295 aa10.94□□□□□ -0.66
SMAD4-205ENST00000588745 SH3BGRLO75368 114 aa10.94□□□□□ -0.66
SMAD4-205ENST00000588745 CIB2O75838 187 aa10.94□□□□□ -0.66
SMAD4-205ENST00000588745 TGFB1P01137 390 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms