RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 AMER2Q8N7J2 671 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 NFKBIDQ8NI38 313 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 ZNF461Q8TAF7 563 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 C17orf50Q8WW18 174 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 PIH1D2Q8WWB5 315 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 BARD1Q99728 777 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 TRMT61BQ9BVS5 477 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 EMILIN2Q9BXX0 1053 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 CD320Q9NPF0 282 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 SNTG1Q9NSN8 517 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 VPS29Q9UBQ0 182 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 ATP6V1HQ9UI12 483 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 LTBP1Q14766 1721 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 EEDO75530 441 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 EPOP01588 193 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 C8orf89P0DMQ9 161 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 EPHA2P29317 976 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 ALDH3B2P48448 385 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 XKR4Q5GH76 650 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 CADM3Q8N126 398 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 OR5K1Q8NHB7 308 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 PYURFQ96I23 114 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 MAELQ96JY0 434 aaKnown RBP13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 ERVK13-1Q9NX77 482 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 TAS2R16Q9NYV7 291 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 TBC1D14Q9P2M4 693 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 PCDHGA11Q9Y5H2 935 aa13.33□□□□□ -0.28
CACNA1A-209ENST00000587525 C6orf47O95873 294 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 NR2F1P10589 423 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 HLCSP50747 726 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 SVOPQ8N4V2 548 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 NECTIN4Q96NY8 510 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 BBS4Q96RK4 519 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 ELOVL2Q9NXB9 296 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 DNAJC27Q9NZQ0 273 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 ZNF225Q9UK10 706 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 FER1L6Q2WGJ9 1857 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 HNRNPCL2B2RXH8 293 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 SLC28A2O43868 658 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 RPS17P08708 135 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 CTGFP29279 349 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 RPL26P61254 145 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 SLBPQ14493 270 aaKnown RBP eCLIP13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 ELMSAN1Q6PJG2 1045 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 EIF3MQ7L2H7 374 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 VN1R5Q7Z5H4 357 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 ARMC8Q8IUR7 673 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 SH3YL1Q96HL8 342 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 ARNT2Q9HBZ2 717 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 IL20RAQ9UHF4 553 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 PCDH7O60245 1069 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 STSP08842 583 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 CYBAP13498 195 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 ZNF24P17028 368 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 SOX6P35712 828 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 POLR2LP62875 67 aaKnown RBP13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 LY6G5CQ5SRR4 150 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 VRK3Q8IV63 474 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 LGI4Q8N135 537 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 S100ZQ8WXG8 99 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 ISL2Q96A47 359 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 C1GALT1C1Q96EU7 318 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 ZNF347Q96SE7 839 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 ACPTQ9BZG2 426 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 TP63Q9H3D4 680 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 TIGARQ9NQ88 270 aa13.32□□□□□ -0.28
CACNA1A-209ENST00000587525 SLC1A7O00341 560 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 TMCC2O75069 709 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 PRLP01236 227 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 C1QCP02747 245 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 ACPPP15309 386 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 RPP38P78345 283 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 MBTPS1Q14703 1052 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 PLEKHG6Q3KR16 790 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 SLC36A3Q495N2 470 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 GPAT3Q53EU6 434 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 ARMCX4Q5H9R4 360 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 NEK5Q6P3R8 708 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 TRUB1Q8WWH5 349 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 PPP1R14BQ96C90 147 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 Q96MT0 163 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 ZNF583Q96ND8 569 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 MGME1Q9BQP7 344 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 KLHL1Q9NR64 748 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 SLC6A13Q9NSD5 602 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 TVP23BQ9NYZ1 205 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 ZNF221Q9UK13 617 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 SLC9A8Q9Y2E8 581 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 PCDHA9Q9Y5H5 950 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 FAM227AF5H4B4 570 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 OR7A17O14581 309 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 STX16O14662 325 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 CPNE3O75131 537 aaKnown RBP13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 FGF4P08620 206 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 HMGCLP35914 325 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 TAS2R50P59544 299 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 AP1S1P61966 158 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 GSTM4Q03013 218 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 TIGD6Q17RP2 521 aa13.31□□□□□ -0.28
CACNA1A-209ENST00000587525 AGTRAPQ6RW13 159 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms