RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 COQ10BQ9H8M1 238 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 TRPV5Q9NQA5 729 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 FBXL12Q9NXK8 326 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 DLGAP2Q9P1A6 1054 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 BTNL2Q9UIR0 455 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 INVSQ9Y283 1065 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 NEUROG3Q9Y4Z2 214 aa10.87□□□□□ -0.67
LIG3-204ENST00000585740 KRT87PA6NCN2 255 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 MAGEB17A8MXT2 336 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 ANHXE9PGG2 379 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 RFXANKO14593 260 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 KDM1AO60341 852 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 DEAF1O75398 565 aaPredicted RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 RETP07949 1114 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 HOXC4P09017 264 aaPredicted RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 SLC35G4P0C7Q5 338 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 RAP2AP10114 183 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 MTHFD1P11586 935 aaKnown RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 MYCLP1P12525 358 aaPredicted RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 COX7A2P14406 83 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 NCK1P16333 377 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 DDX5P17844 614 aaKnown RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 IL1RNP18510 177 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 DRD1P21728 446 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 TACR1P25103 407 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 SEC13P55735 322 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 TSTA3Q13630 321 aaPredicted RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 THEMIS2Q5TEJ8 643 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 CAPRIN2Q6IMN6 1127 aaKnown RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 ERICH5Q6P6B1 374 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 FAM83HQ6ZRV2 1179 aaPredicted RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 R3HCC1LQ7Z5L2 792 aaKnown RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 C17orf64Q86WR6 236 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 CALHM3Q86XJ0 350 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 MSRB3Q8IXL7 192 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 DTWD1Q8N5C7 304 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 C1orf52Q8N6N3 182 aaKnown RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 MFSD2AQ8NA29 543 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 OR10A6Q8NH74 314 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 OR5K2Q8NHB8 316 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 C11orf24Q96F05 449 aaPredicted RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 BDH2Q9BUT1 245 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 RAB11FIP5Q9BXF6 653 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 EBPLQ9BY08 206 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 MAGIXQ9H6Y5 334 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 RPF2Q9H7B2 306 aaKnown RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 KAT8Q9H7Z6 458 aaKnown RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 UBE2ZQ9H832 354 aaPredicted RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 NT5DC2Q9H857 520 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 ZDHHC4Q9NPG8 344 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 SERHLQ9NQF3 203 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 DMRT3Q9NQL9 472 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 GEMIN8Q9NWZ8 242 aaKnown RBP10.86□□□□□ -0.67
LIG3-204ENST00000585740 AHSPQ9NZD4 102 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 FZD4Q9ULV1 537 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 CORO2BQ9UQ03 480 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 NCKAP1Q9Y2A7 1128 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 PCDHB14Q9Y5E9 798 aa10.86□□□□□ -0.67
LIG3-204ENST00000585740 PIPSLA2A3N6 862 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 CACNB4O00305 520 aaPredicted RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 CXCR6O00574 342 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 FPGTO14772 594 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 SCAMP2O15127 329 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 PCDH7O60245 1069 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 RNGTTO60942 597 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 EPN2O95208 641 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 LRATO95237 230 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 ANXA4P09525 319 aaPredicted RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 ZCCHC18P0CG32 403 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 HOXB2P14652 356 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 IL9P15248 144 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 HOXB9P17482 250 aaPredicted RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 PTX3P26022 381 aaPredicted RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 CTHP32929 405 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 SOX9P48436 509 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 CCT8P50990 548 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 RPS13P62277 151 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 YBX1P67809 324 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 PHC1P78364 1004 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 MRPS21P82921 87 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 TXNL4AP83876 142 aaKnown RBP10.85□□□□□ -0.67
LIG3-204ENST00000585740 PLIN5Q00G26 463 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 CTBSQ01459 385 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 UGT8Q16880 541 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 LEXMQ3ZCV2 418 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 TMEM259Q4ZIN3 620 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 C2orf27AQ580R0 203 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 CPTPQ5TA50 214 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 OR4F3Q6IEY1 312 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 UGT2A3Q6UWM9 527 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 USP30Q70CQ3 517 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 SPRED1Q7Z699 444 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 SERPINA11Q86U17 422 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 HORMAD1Q86X24 394 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 EID3Q8N140 333 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 SMPDL3AQ92484 453 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 SNX19Q92543 992 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 FAM162AQ96A26 154 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 MTERF3Q96E29 417 aa10.85□□□□□ -0.67
LIG3-204ENST00000585740 REXO5Q96IC2 774 aaKnown RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms