RNA–Protein interactions for RNA: ENST00000584437.5

RNF43-208, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 5,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-208ENST00000584437 GALNT7Q86SF2 657 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 ZNF227Q86WZ6 799 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 TMEM74Q96NL1 305 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 GAL3ST1Q99999 423 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 TPT1P8Q9HAU6 139 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 OR51F1A6NGY5 319 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 LRRC72A6NJI9 287 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 ZNF208O43345 1280 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 TLX2O43763 284 aaPredicted RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 NFATC1O95644 943 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 CHRNA1P02708 482 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 LMO2P25791 158 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 DGKGP49619 791 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 PRKCDQ05655 676 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 SLBPQ14493 270 aaKnown RBP eCLIP12.7□□□□□ -0.38
RNF43-208ENST00000584437 EIF2S3LQ2VIR3 472 aaKnown RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 MYLK3Q32MK0 819 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 GXYLT1Q4G148 440 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 HMBOX1Q6NT76 420 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 OR4F6Q8NGB9 312 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 OR8J3Q8NGG0 315 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 CLEC4CQ8WTT0 213 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 RGMAQ96B86 450 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 TRIM43Q96BQ3 446 aaPredicted RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 FBXL18Q96ME1 805 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 POPDC3Q9HBV1 291 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 NEUROD4Q9HD90 331 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 CUEDC1Q9NWM3 386 aaPredicted RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 G6PDP11413 515 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 IL12BP29460 328 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 CTNNB1P35222 781 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 HLCSP50747 726 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 CCR8P51685 355 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 SOWAHAQ2M3V2 549 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 HAGHLQ6PII5 290 aaPredicted RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 TREML1Q86YW5 311 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 METTL21AQ8WXB1 218 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 SIGLEC10Q96LC7 697 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 ASPNQ9BXN1 380 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 FZD1Q9UP38 647 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 ZNF487B1APH4 448 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 BHMG1C9JSJ3 638 aaPredicted RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 ZNF670-ZNF695F2Z2N8 137 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 LAG3P18627 525 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 PPP1R8Q12972 351 aaKnown RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 SP140Q13342 867 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 SIRPB2Q5JXA9 342 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 OGFRL1Q5TC84 451 aaPredicted RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 TXNRD3NBQ6F5E7 133 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 SLC15A3Q8IY34 581 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 SCML4Q8N228 414 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 C1orf52Q8N6N3 182 aaKnown RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 ZNF675Q8TD23 568 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 ZNF516Q92618 1163 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 CMTM7Q96FZ5 175 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 IGFLR1Q9H665 355 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 TIGARQ9NQ88 270 aa12.7□□□□□ -0.38
RNF43-208ENST00000584437 NOP16Q9Y3C1 178 aaKnown RBP12.7□□□□□ -0.38
RNF43-208ENST00000584437 PPLO60437 1756 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 APODP05090 189 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 CHRM1P11229 460 aaPredicted RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 ANXA3P12429 323 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 ATP5A1P25705 553 aaKnown RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 GOLGA7Q7Z5G4 137 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 SNX29P2Q8IUI4 249 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 CHERPQ8IWX8 916 aaKnown RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 CPA6Q8N4T0 437 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 DENND6BQ8NEG7 585 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 KCTD13Q8WZ19 329 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 LRCH3Q96II8 777 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 ZNF471Q9BX82 626 aaPredicted RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 PAK1IP1Q9NWT1 392 aaPredicted RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 SCP2D1Q9UJQ7 156 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 PRSS51A0A1B0GVH4 220 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 NT5C1B-RDH14C9J2C7 533 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 ENPP3O14638 875 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 PLD2O14939 933 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 CXCL14O95715 111 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 GABARAPL2P60520 117 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 RPS3AP61247 264 aaKnown RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 KCNAB2Q13303 367 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 MPP2Q14168 576 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 LPIN3Q9BQK8 851 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 PCDHAC2Q9Y5I4 1007 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 MT-ND5P03915 603 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 PCCBP05166 539 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 BCHEP06276 602 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 SLC3A1Q07837 685 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 SCGB2B2Q4G0G5 96 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 PIGGQ5H8A4 983 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 LBX2Q6XYB7 198 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 PIAS4Q8N2W9 510 aaPredicted RBP12.69□□□□□ -0.38
RNF43-208ENST00000584437 SLC44A3Q8N4M1 653 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 TMEM199Q8N511 208 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 GLIS1Q8NBF1 620 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 NFKBIDQ8NI38 313 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 RIPOR3Q96MK2 946 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 HIST1H2AAQ96QV6 131 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 TMEM246Q9BRR3 403 aa12.69□□□□□ -0.38
RNF43-208ENST00000584437 PADI3Q9ULW8 664 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms