RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 GPAMQ9HCL2 828 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 GPR83Q9NYM4 423 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 ZNF282Q9UDV7 671 aaPredicted RBP19.45■□□□□ 0.7
SS18-224ENST00000584083 IKZF3Q9UKT9 509 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 ZNF451Q9Y4E5 1061 aa19.45■□□□□ 0.7
SS18-224ENST00000584083 SCN3AQ9NY46 2000 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 NPEPPSL1A6NEC2 478 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 VSTM2BA6NLU5 285 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 CDC7O00311 574 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 P2RX6O15547 441 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 ANXA5P08758 320 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 NPPBP16860 134 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 GRK3P35626 688 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 MAGEA4P43358 317 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 POU4F1Q01851 419 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 RAPSNQ13702 412 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 NDUFA9Q16795 377 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 WHAMMP3Q1A5X7 153 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 SBSNQ6UWP8 590 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 ZDHHC24Q6UX98 284 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 CEP97Q8IW35 865 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 CTAGE3PQ8IX95 158 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 OR56A3Q8NH54 315 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 STT3BQ8TCJ2 826 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 MIEF2Q96C03 454 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 MVB12AQ96EY5 273 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 MMABQ96EY8 250 aaPredicted RBP19.44■□□□□ 0.7
SS18-224ENST00000584083 CPNE1Q99829 537 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 LRRC1Q9BTT6 524 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 CRB3Q9BUF7 120 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 PHACTR1Q9C0D0 580 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 DRC3Q9H069 523 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 MLXIPLQ9NP71 852 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 TRPC4Q9UBN4 977 aa19.44■□□□□ 0.7
SS18-224ENST00000584083 NOVA2Q9UNW9 492 aaKnown RBP19.44■□□□□ 0.7
SS18-224ENST00000584083 MTO1Q9Y2Z2 717 aaKnown RBP19.44■□□□□ 0.7
SS18-224ENST00000584083 A0A0A6YYC8 382 aaPredicted RBP19.43■□□□□ 0.7
SS18-224ENST00000584083 ESYT3A0FGR9 886 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 FEZF1A0PJY2 475 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 I3L1I5 382 aaPredicted RBP19.43■□□□□ 0.7
SS18-224ENST00000584083 AGPSO00116 658 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 ZGLP1P0C6A0 271 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 GPX6P59796 221 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 DSG2Q14126 1118 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 USP10Q14694 798 aaKnown RBP19.43■□□□□ 0.7
SS18-224ENST00000584083 RBBP7Q16576 425 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 ZXDCQ2QGD7 858 aaPredicted RBP19.43■□□□□ 0.7
SS18-224ENST00000584083 CYS1Q717R9 158 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 ANKRD49Q8WVL7 239 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 ANKRD7Q92527 254 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 NACC2Q96BF6 587 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 THAP11Q96EK4 314 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 TSPAN17Q96FV3 270 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 EGFL8Q99944 293 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 MCMBPQ9BTE3 642 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 NUDT9Q9BW91 350 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 CAB39LQ9H9S4 337 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 POPDC3Q9HBV1 291 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 ATP13A2Q9NQ11 1180 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 SEMA3GQ9NS98 782 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 CTNNAL1Q9UBT7 734 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 FBXL4Q9UKA2 621 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 PCDHGB7Q9Y5F8 929 aa19.43■□□□□ 0.7
SS18-224ENST00000584083 KCNE1BA0A087WTH5 132 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 FAM159BA6NKW6 160 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 MASP2O00187 686 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 FFAR3O14843 346 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 GPR42O15529 346 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 WISP1O95388 367 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 GP5P40197 560 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 CCR8P51685 355 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 KCNC4Q03721 635 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 KLC1Q07866 573 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 VWA2Q5GFL6 755 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 FRA10AC1Q70Z53 315 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 VN1R4Q7Z5H5 301 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 GALNT16Q8N428 558 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 PPM1NQ8N819 430 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 VPS50Q96JG6 964 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 OR4K3Q96R72 315 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 RBBP8Q99708 897 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 HS3ST3B1Q9Y662 390 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 BSNQ9UPA5 3926 aa19.42■□□□□ 0.7
SS18-224ENST00000584083 SOCS6O14544 535 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 FOXS1O43638 330 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 ZIC2O95409 532 aaPredicted RBP19.41■□□□□ 0.7
SS18-224ENST00000584083 BCL6P41182 706 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 AVPR1BP47901 424 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 FAM53BQ14153 422 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 CSHL1Q14406 222 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 TSNQ15631 228 aaKnown RBP19.41■□□□□ 0.7
SS18-224ENST00000584083 PPP1R3AQ16821 1122 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 KBTBD12Q3ZCT8 623 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 KIRREL2Q6UWL6 708 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 ADAMTSL2Q86TH1 951 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 ARHGEF39Q8N4T4 335 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 CAMKVQ8NCB2 501 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 MACROD1Q9BQ69 325 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 LRRC4CQ9HCJ2 640 aa19.41■□□□□ 0.7
SS18-224ENST00000584083 C3orf18Q9UK00 162 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms