RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 C15orf32Q32M92 178 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 GPR33Q49SQ1 333 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 OR4A47Q6IF82 309 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 LCLAT1Q6UWP7 414 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 ZER1Q7Z7L7 766 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 DNAAF5Q86Y56 855 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 ZNF584Q8IVC4 421 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 KLHDC1Q8N7A1 406 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 TDRD5Q8NAT2 981 aaKnown RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 TSPAN14Q8NG11 270 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 NPRL2Q8WTW4 380 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 TOMM40LQ969M1 308 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 ZNF414Q96IQ9 312 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 C2orf48Q96LS8 159 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 ZNF830Q96NB3 372 aaPredicted RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 TUBB1Q9H4B7 451 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 HEXA-AS1Q9H8Q6 139 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 Q9H8V8 135 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 GPN1Q9HCN4 374 aaPredicted RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 THAP10Q9P2Z0 257 aaPredicted RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 SLC24A2Q9UI40 661 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 PPIEQ9UNP9 301 aaKnown RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 TMEM5Q9Y2B1 443 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 RPS6KL1Q9Y6S9 549 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 RICTORQ6R327 1708 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 NUP153P49790 1475 aaKnown RBP3.21□□□□□ -1.9
COPS3-217ENST00000583160 FRMPD1Q5SYB0 1578 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 HECW2Q9P2P5 1572 aa3.21□□□□□ -1.9
COPS3-217ENST00000583160 FHOD3Q2V2M9 1422 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 EFCAB5A4FU69 1503 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 KIF21BO75037 1637 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 BCORL1Q5H9F3 1711 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 NPIPB9F8W1W9 429 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 ATP1B1P05026 303 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 HOXD4P09016 255 aaPredicted RBP3.2□□□□□ -1.9
COPS3-217ENST00000583160 FOLR2P14207 255 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 IL4RP24394 825 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 CD27P26842 260 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 TRAP1Q12931 704 aaKnown RBP3.2□□□□□ -1.9
COPS3-217ENST00000583160 CUL3Q13618 768 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 TRIM29Q14134 588 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 C6orf163Q5TEZ5 329 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 SEL1L3Q68CR1 1132 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 FAM131BQ86XD5 332 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 FAM89BQ8N5H3 189 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.2□□□□□ -1.9
COPS3-217ENST00000583160 SYT2Q8N9I0 419 aaPredicted RBP3.2□□□□□ -1.9
COPS3-217ENST00000583160 MOB3AQ96BX8 217 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 MAP3K3Q99759 626 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 PRRG4Q9BZD6 226 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 MTHFD2LQ9H903 347 aaPredicted RBP3.2□□□□□ -1.9
COPS3-217ENST00000583160 OLAHQ9NV23 265 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 PRDM4Q9UKN5 801 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 SELENOKQ9Y6D0 94 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 MAGI2Q86UL8 1455 aa3.2□□□□□ -1.9
COPS3-217ENST00000583160 IGHV4-30-2A0A087WSY4 118 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 TRBV4-1A0A0J9YWV2 114 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 A0A1W2PPM1 405 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 ANKRD18BA2A2Z9 1011 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 SHISA7A6NL88 538 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 TRIM77I1YAP6 450 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 ETV5P41161 510 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 ZFP36L2P47974 494 aaKnown RBP3.19□□□□□ -1.9
COPS3-217ENST00000583160 LHX1P48742 406 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 DHODHQ02127 395 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 ZNF841Q6ZN19 808 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 CDHR3Q6ZTQ4 885 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 FCRLAQ7L513 359 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 SLC25A42Q86VD7 318 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 MARCH9Q86YJ5 346 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 NOA1Q8NC60 698 aaKnown RBP3.19□□□□□ -1.9
COPS3-217ENST00000583160 GCNAQ96QF7 691 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 ABHD1Q96SE0 405 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 CHCHD5Q9BSY4 110 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 PARLQ9H300 379 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 ANKZF1Q9H8Y5 726 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 IL17BQ9UHF5 180 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 LNPEPQ9UIQ6 1025 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 CPSF3Q9UKF6 684 aaKnown RBP3.19□□□□□ -1.9
COPS3-217ENST00000583160 GPR34Q9UPC5 381 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 CFAP74Q9C0B2 1584 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 REREQ9P2R6 1566 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 IGSF1Q8N6C5 1336 aa3.19□□□□□ -1.9
COPS3-217ENST00000583160 FER1L5A0AVI2 2057 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 PTPRMP28827 1452 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.18□□□□□ -1.9
COPS3-217ENST00000583160 KLLNB2CW77 178 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 SHISA9B4DS77 424 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 G3V2L1 256 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 PHOX2AO14813 284 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 SNAP91O60641 907 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 BEST1O76090 585 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 GP9P14770 177 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 BCL3P20749 454 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 CLCN4P51793 760 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 POLR2LP62875 67 aaKnown RBP3.18□□□□□ -1.9
COPS3-217ENST00000583160 FCHO2Q0JRZ9 810 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 ZNF177Q13360 481 aaPredicted RBP3.18□□□□□ -1.9
COPS3-217ENST00000583160 MS4A18Q3C1V0 323 aa3.18□□□□□ -1.9
COPS3-217ENST00000583160 GARNL3Q5VVW2 1013 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms