RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 CCSMST1Q4G0I0 132 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 KIAA1614Q5VZ46 1190 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 SBSNQ6UWP8 590 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 FRMD7Q6ZUT3 714 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 CLNKQ7Z7G1 428 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 MTDHQ86UE4 582 aaKnown RBP12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 KMT5CQ86Y97 462 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 GPSM1Q86YR5 675 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 SYTL1Q8IYJ3 562 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 SMPDL3AQ92484 453 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 EXT2Q93063 718 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 KLHL29Q96CT2 875 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 CCDC74BQ96LY2 380 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 SORT1Q99523 831 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 PKP4Q99569 1192 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 CCDC28BQ9BUN5 200 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 SEMA6CQ9H3T2 930 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 CLMPQ9H6B4 373 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.99□□□□□ -0.339e-8■■■■■ 48.4
CSNK1D-220ENST00000581737 CIDEBQ9UHD4 219 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 ADAMTS6Q9UKP5 1117 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 OARD1Q9Y530 152 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 RELNP78509 3460 aa12.99□□□□□ -0.33
CSNK1D-220ENST00000581737 PMS2P1A4D2B8 440 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 ISM1B1AKI9 464 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CDC7O00311 574 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 BTN3A3O00478 584 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 FCHO1O14526 889 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 ITM2AO43736 263 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 SUPT7LO94864 414 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CCNDBP1O95273 360 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 MLYCDO95822 493 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CHEK2O96017 543 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 SBK3P0C264 359 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CDH3P22223 829 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CALB2P22676 271 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CCND1P24385 295 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CSTF2P33240 577 aaKnown RBP eCLIP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 ARL4DP49703 201 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 HNMTP50135 292 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 PDX1P52945 283 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 ALDH18A1P54886 795 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 PCBP4P57723 403 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 TMPRSS3P57727 454 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 GABREP78334 506 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 RHDQ02161 417 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CDC16Q13042 620 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 PHKG1Q16816 387 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 PPP1R3AQ16821 1122 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 SLC5A12Q1EHB4 618 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 ARL13AQ5H913 290 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CDKL4Q5MAI5 379 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 SNAP47Q5SQN1 464 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CACHD1Q5VU97 1274 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 METTL2BQ6P1Q9 378 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CYB5D1Q6P9G0 228 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 SPESP1Q6UW49 350 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 ZNF574Q6ZN55 896 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 FAM92BQ6ZTR7 304 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 TMPRSS9Q7Z410 1059 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 B3GNT8Q7Z7M8 397 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 SPNS2Q8IVW8 549 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 TCAIMQ8N3R3 496 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 TMEM151AQ8N4L1 468 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 PTGR2Q8N8N7 351 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 LINC01555Q8NAE3 123 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 AGBL5Q8NDL9 886 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 ZNF480Q8WV37 535 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 DLG3Q92796 817 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 WBP1Q96G27 269 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 ZNF578Q96N58 590 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 IL17FQ96PD4 163 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CMKLR1Q99788 373 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 TWSG1Q9GZX9 223 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 PCBD2Q9H0N5 130 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 ASCL3Q9NQ33 180 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 TCF7L2Q9NQB0 619 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CCDC177Q9NQR7 707 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 C1GALT1Q9NS00 363 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 INTS7Q9NVH2 962 aaKnown RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 CD274Q9NZQ7 290 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 TMEM9Q9P0T7 183 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 STOX2Q9P2F5 926 aaPredicted RBP12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 KLHL3Q9UH77 587 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 PCM1Q15154 2024 aa12.98□□□□□ -0.33
CSNK1D-220ENST00000581737 A0A0J9YY10 115 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 KLK10O43240 276 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 CRCPO75575 148 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 ANXA5P08758 320 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 ESRRAP11474 423 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 UGT2B7P16662 529 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 IMPA1P29218 277 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 PRDX3P30048 256 aaKnown RBP12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 ADSLP30566 484 aaPredicted RBP12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 PIK3CGP48736 1102 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 KCNC4Q03721 635 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 SH2D4BQ5SQS7 431 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 ZNF678Q5SXM1 525 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 AGTRAPQ6RW13 159 aa12.97□□□□□ -0.33
CSNK1D-220ENST00000581737 ARHGAP22Q7Z5H3 698 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms