RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 TTC19Q6DKK2 380 aaPredicted RBP14.89□□□□□ -0.03
SS18-216ENST00000580751 CEACAM20Q6UY09 585 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 FRMD7Q6ZUT3 714 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 LRRC70Q7Z2Q7 622 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 CRLF3Q8IUI8 442 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 OR8K5Q8NH50 307 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 N4BP2L2Q92802 583 aaPredicted RBP14.89□□□□□ -0.03
SS18-216ENST00000580751 PHF21BQ96EK2 531 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 PRR11Q96HE9 360 aaPredicted RBP14.89□□□□□ -0.03
SS18-216ENST00000580751 MAGEB10Q96LZ2 347 aaPredicted RBP14.89□□□□□ -0.03
SS18-216ENST00000580751 OR6C1Q96RD1 312 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 TAAR9Q96RI9 348 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 ZPBPQ9BS86 351 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 CD244Q9BZW8 370 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 FGF21Q9NSA1 209 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 RARRES3Q9UL19 164 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 SLC22A14Q9Y267 594 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 KLHL20Q9Y2M5 609 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 PCDHGA3Q9Y5H0 932 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 KCNE2Q9Y6J6 123 aa14.89□□□□□ -0.03
SS18-216ENST00000580751 OR2A25A4D2G3 310 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 KATNA1O75449 491 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 FOLR1P15328 257 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 ETV5P41161 510 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 HSPA7P48741 367 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 RELAQ04206 551 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 LCP2Q13094 533 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 C18orf21Q32NC0 220 aaPredicted RBP14.88□□□□□ -0.03
SS18-216ENST00000580751 DCAF12Q5T6F0 453 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 FCRL6Q6DN72 434 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 ZNF425Q6IV72 752 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 ADCK2Q7Z695 626 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 ZNF483Q8TF39 744 aaPredicted RBP14.88□□□□□ -0.03
SS18-216ENST00000580751 SLC5A11Q8WWX8 675 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 SLC46A1Q96NT5 459 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 OR4K3Q96R72 315 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 PLCD4Q9BRC7 762 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 ILKAPQ9H0C8 392 aaPredicted RBP14.88□□□□□ -0.03
SS18-216ENST00000580751 FAM60AQ9NP50 221 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 THSD1Q9NS62 852 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 TMEM184CQ9NVA4 438 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 DNAJC11Q9NVH1 559 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 CUEDC1Q9NWM3 386 aaPredicted RBP14.88□□□□□ -0.03
SS18-216ENST00000580751 GPRC5BQ9NZH0 403 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 OPTCQ9UBM4 332 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 PLCL2Q9UPR0 1127 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 RAP2CQ9Y3L5 183 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 PCDHGA7Q9Y5G6 932 aa14.88□□□□□ -0.03
SS18-216ENST00000580751 IGKV1-8A0A0C4DH67 115 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 K7EPI3 171 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 E2F3O00716 465 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 BRINP1O60477 761 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 CCNT2O60583 730 aaKnown RBP14.87□□□□□ -0.03
SS18-216ENST00000580751 PRAMEF10O60809 474 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 SUPT7LO94864 414 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 HSPA4LO95757 839 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 FGF5P12034 268 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 CDH1P12830 882 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 EZRP15311 586 aaKnown RBP14.87□□□□□ -0.03
SS18-216ENST00000580751 GNAZP19086 355 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 EEF1DP29692 281 aaKnown RBP14.87□□□□□ -0.03
SS18-216ENST00000580751 GRK3P35626 688 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 GDF5P43026 501 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 CCR8P51685 355 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 PKNOX1P55347 436 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 YBX1P67809 324 aaKnown RBP14.87□□□□□ -0.03
SS18-216ENST00000580751 PCDH1Q08174 1060 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 CDC16Q13042 620 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 GPR19Q15760 415 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.87□□□□□ -0.03
SS18-216ENST00000580751 UNC50Q53HI1 259 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 CPLX4Q7Z7G2 160 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 PAQR7Q86WK9 346 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 PPP1R3BQ86XI6 285 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 LRRC34Q8IZ02 419 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 DNAJC22Q8N4W6 341 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 AFAP1L2Q8N4X5 818 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 CCNYL1Q8N7R7 359 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 ABHD11Q8NFV4 315 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 STON2Q8WXE9 905 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 USP7Q93009 1102 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 NEIL2Q969S2 332 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 ZNF501Q96CX3 271 aaPredicted RBP14.87□□□□□ -0.03
SS18-216ENST00000580751 FAR2Q96K12 515 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 ZNF578Q96N58 590 aaPredicted RBP14.87□□□□□ -0.03
SS18-216ENST00000580751 FCRL4Q96PJ5 515 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 ZFYVE21Q9BQ24 234 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 GSTO2Q9H4Y5 243 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 ASCL3Q9NQ33 180 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 PCTPQ9UKL6 214 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 SH2B3Q9UQQ2 575 aa14.87□□□□□ -0.03
SS18-216ENST00000580751 HEATR5BQ9P2D3 2071 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 AHCTF1Q8WYP5 2266 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 CDRT15L2A8MXV6 281 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 TMEM150CB9EJG8 249 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 H7BY64 318 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 NVLO15381 856 aaKnown RBP14.86□□□□□ -0.03
SS18-216ENST00000580751 RRP9O43818 475 aaKnown RBP14.86□□□□□ -0.03
SS18-216ENST00000580751 FGF4P08620 206 aa14.86□□□□□ -0.03
SS18-216ENST00000580751 TROVE2P10155 538 aaKnown RBP eCLIP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms