RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 MAGEB16A2A368 324 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 ARHGEF33A8MVX0 844 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 H0YIG0 161 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 NIPSNAP2O75323 286 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 SYF2O95926 243 aaKnown RBP16.96■□□□□ 0.31
MKS1-209ENST00000580127 F10P00742 488 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 ITGAMP11215 1152 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 OGNP20774 298 aaKnown RBP16.96■□□□□ 0.31
MKS1-209ENST00000580127 PTK6Q13882 451 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 GBX1Q14549 363 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 PCOLCEQ15113 449 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 ZNF630Q2M218 657 aaPredicted RBP16.96■□□□□ 0.31
MKS1-209ENST00000580127 TYSND1Q2T9J0 566 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 ZNF425Q6IV72 752 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 CPEB2Q7Z5Q1 589 aaKnown RBP16.96■□□□□ 0.31
MKS1-209ENST00000580127 PRUNE1Q86TP1 453 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 HORMAD2Q8N7B1 307 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 FBXO15Q8NCQ5 510 aaPredicted RBP16.96■□□□□ 0.31
MKS1-209ENST00000580127 MFSD3Q96ES6 412 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 CCDC120Q96HB5 630 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 IMMP1LQ96LU5 166 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 CYTH2Q99418 400 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 FAM129AQ9BZQ8 928 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 ABCF3Q9NUQ8 709 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 INTS10Q9NVR2 710 aaKnown RBP16.96■□□□□ 0.31
MKS1-209ENST00000580127 SAMD15Q9P1V8 674 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 KLHL42Q9P2K6 505 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 SOX13Q9UN79 622 aa16.96■□□□□ 0.31
MKS1-209ENST00000580127 APCP25054 2843 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 CTAGE9A4FU28 777 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 KRT87PA6NCN2 255 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 SMAPO00193 183 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 FFAR3O14843 346 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 GPR42O15529 346 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 FOXS1O43638 330 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 NRP2O60462 931 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 SLC16A8O95907 504 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 ZSCAN5DPP0CG00 497 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 AGAP20933 346 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 MGAT1P26572 445 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 AGTR2P50052 363 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 YBX1P67809 324 aaKnown RBP16.95■□□□□ 0.3
MKS1-209ENST00000580127 ACTN3Q08043 901 aaPredicted RBP16.95■□□□□ 0.3
MKS1-209ENST00000580127 THOC5Q13769 683 aaKnown RBP16.95■□□□□ 0.3
MKS1-209ENST00000580127 EXT1Q16394 746 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 BTBD16Q32M84 506 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 MINDY4Q4G0A6 757 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 ACSBG2Q5FVE4 666 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 ZNF766Q5HY98 468 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 NEPROQ6NW34 567 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 CASC4Q6P4E1 433 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 FAM136AQ96C01 138 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 THAP11Q96EK4 314 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 MAGED4Q96JG8 741 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 PCBD2Q9H0N5 130 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 TMEM184CQ9NVA4 438 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 GUCA1BQ9UMX6 200 aa16.95■□□□□ 0.3
MKS1-209ENST00000580127 GOLGA6L6A8MZA4 724 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 E7ENX8 843 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 SLC19A2O60779 497 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 ENO3P13929 434 aaPredicted RBP16.94■□□□□ 0.3
MKS1-209ENST00000580127 CD46P15529 392 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 RPS15AP62244 130 aaKnown RBP16.94■□□□□ 0.3
MKS1-209ENST00000580127 TAP2Q03519 686 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.94■□□□□ 0.3
MKS1-209ENST00000580127 ACER2Q5QJU3 275 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 PLAG1Q6DJT9 500 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 KIAA0930Q6ICG6 404 aaPredicted RBP16.94■□□□□ 0.3
MKS1-209ENST00000580127 CES3Q6UWW8 571 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 ZC3H7AQ8IWR0 971 aaKnown RBP16.94■□□□□ 0.3
MKS1-209ENST00000580127 REXO1L1PQ8IX06 675 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 FAM98AQ8NCA5 519 aaKnown RBP16.94■□□□□ 0.3
MKS1-209ENST00000580127 ZNF480Q8WV37 535 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 ASB11Q8WXH4 323 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 UTP23Q9BRU9 249 aaKnown RBP16.94■□□□□ 0.3
MKS1-209ENST00000580127 DESI2Q9BSY9 194 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 KCNK13Q9HB14 408 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 GPAMQ9HCL2 828 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 CAPN6Q9Y6Q1 641 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 PCNX1Q96RV3 2341 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 PKDREJQ9NTG1 2253 aa16.94■□□□□ 0.3
MKS1-209ENST00000580127 KCNE1BA0A087WTH5 132 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 IGKV1-8A0A0C4DH67 115 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 GOLGA8KD6RF30 607 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 GOLGA8TH3BQL2 631 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 H7BY64 318 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 CDK2AP1O14519 115 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 KIF5CO60282 957 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 NSA2O95478 260 aaKnown RBP16.93■□□□□ 0.3
MKS1-209ENST00000580127 MPC1LP0DKB6 136 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 TPSB2P20231 275 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 IL10P22301 178 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 MST1P26927 711 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 GRK3P35626 688 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 TPSAB1Q15661 275 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 MEP1AQ16819 746 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 SYT16Q17RD7 645 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 CILP2Q8IUL8 1156 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 PALM2Q8IXS6 379 aa16.93■□□□□ 0.3
MKS1-209ENST00000580127 EID3Q8N140 333 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms