RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 GPRIN3Q6ZVF9 776 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 RNF44Q7L0R7 432 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 D2HGDHQ8N465 521 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 ZNF740Q8NDX6 193 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 LRRC8CQ8TDW0 803 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 GRAMD1AQ96CP6 724 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 MAGEB10Q96LZ2 347 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 MAGEB18Q96M61 343 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 SARGQ9BW04 601 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 C20orf27Q9GZN8 174 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 ZNF395Q9H8N7 513 aaPredicted RBP15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 EML4Q9HC35 981 aaKnown RBP15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 PDE7BQ9NP56 450 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 MID1IP1Q9NPA3 183 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 SOHLH2Q9NX45 425 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 TRPS1Q9UHF7 1281 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 PILRAQ9UKJ1 303 aa15.25■□□□□ 0.03
CSNK1D-212ENST00000580061 CNOT1A5YKK6 2376 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 KCNE1BA0A087WTH5 132 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 TRBC2A0A5B9 178 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 FEZF1A0PJY2 475 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 DCDC2BA2VCK2 349 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 SNNO75324 88 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 LYPLA1O75608 230 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 SNUPNO95149 360 aaKnown RBP15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 HSPA4LO95757 839 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 JUPP14923 745 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 MLLT3P42568 568 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 ARL4DP49703 201 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 C16orf72Q14CZ0 275 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 KIF26BQ2KJY2 2108 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 ISXQ2M1V0 245 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 CUZD1Q86UP6 607 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 MYLK4Q86YV6 388 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 PLD3Q8IV08 490 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 KRT78Q8N1N4 520 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 DNAJC22Q8N4W6 341 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 ADAMTS14Q8WXS8 1223 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 PRR11Q96HE9 360 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 FCRL4Q96PJ5 515 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 DEPDC7Q96QD5 511 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 SORT1Q99523 831 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 SHCBP1LQ9BZQ2 653 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 PITHD1Q9GZP4 211 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 NT5DC2Q9H857 520 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 TNFRSF12AQ9NP84 129 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 ZNF490Q9ULM2 529 aaPredicted RBP15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 CLCA2Q9UQC9 943 aa15.24■□□□□ 0.03
CSNK1D-212ENST00000580061 A0A0J9YVX5 310 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 H0YIV9 168 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 TMX2-CTNND1H3BSU7 103 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 HGSO14964 777 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 MAP3K7O43318 606 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 HCRTR1O43613 425 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 LCMT2O60294 686 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 CSO75390 466 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 HGFP14210 728 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 MDH1P40925 334 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 SCTRP47872 440 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 GABRA4P48169 554 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 RPS15AP62244 130 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 GUCY1A3Q02108 690 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 CPSF6Q16630 551 aaKnown RBP eCLIP15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 HIST2H2ACQ16777 129 aaPredicted RBP15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 ZC3H12BQ5HYM0 836 aaKnown RBP15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 HIST2H2AA3Q6FI13 130 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 MED27Q6P2C8 311 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 TMIGD1Q6UXZ0 262 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 RGS9BPQ6ZS82 235 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 LAS2Q8IYD9 372 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 CACTIN-AS1Q8N1I8 211 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 UBE2E3Q969T4 207 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 OR2A5Q96R48 311 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 KCNA7Q96RP8 456 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 ZFYVE21Q9BQ24 234 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 SYNPO2LQ9H987 977 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 THAP1Q9NVV9 213 aa15.23■□□□□ 0.03
CSNK1D-212ENST00000580061 DCHS1Q96JQ0 3298 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 OR1F1O43749 312 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 ENO1P06733 434 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 CAPN1P07384 714 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 FGF4P08620 206 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 MSL3P1P0C860 447 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 FOLR1P15328 257 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 CSTF2P33240 577 aaKnown RBP eCLIP15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 BCL6P41182 706 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 FOXA1P55317 472 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 OCRLQ01968 901 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 CYP4F3Q08477 520 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 KCNAB1Q14722 419 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 RBBP5Q15291 538 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 ZRSR2Q15696 482 aaKnown RBP15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 DEFB110Q30KQ9 67 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 TMTC4Q5T4D3 741 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 FAM219BQ5XKK7 198 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 FRMPD2BQ6IN97 320 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 TMPRSS12Q86WS5 348 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 TBC1D19Q8N5T2 526 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 ZNF781Q8N8C0 355 aa15.22■□□□□ 0.03
CSNK1D-212ENST00000580061 CDYL2Q8N8U2 506 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms