RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 KIAA1191Q96A73 305 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TMEM159Q96B96 161 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 FBXL8Q96CD0 374 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 NXNL1Q96CM4 212 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ELMO2Q96JJ3 720 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC41A2Q96JW4 573 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF285Q96NJ3 590 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ZIM3Q96PE6 472 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PKP4Q99569 1192 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TTC1Q99614 292 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SPRY4Q9C004 299 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 UNKQ9C0B0 810 aaKnown RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CHRNA10Q9GZZ6 450 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 XKR8Q9H6D3 395 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CNTD2Q9H8S5 307 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 RDH14Q9HBH5 336 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 FAM60AQ9NP50 221 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC6A20Q9NP91 592 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ASCL3Q9NQ33 180 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PPANQ9NQ55 473 aaKnown RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF446Q9NWS9 450 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 MKS1Q9NXB0 559 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TMEM216Q9P0N5 145 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SPATA7Q9P0W8 599 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 STOX2Q9P2F5 926 aaPredicted RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 CIDEBQ9UHD4 219 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 GPR160Q9UJ42 338 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TRMT6Q9UJA5 497 aaKnown RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 PILRAQ9UKJ1 303 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 KLK13Q9UKR3 277 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 SLC39A10Q9ULF5 831 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 ASF1AQ9Y294 204 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 OARD1Q9Y530 152 aa3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 TPRP12270 2363 aaKnown RBP3.65□□□□□ -1.83
SMARCE1-215ENST00000578995 MGAQ8IWI9 3026 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 A0A096LPK6 155 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 A0A1B0GTL3 188 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 OR2A25A4D2G3 310 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 FAM149AA5PLN7 773 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 OR6C74A6NCV1 312 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TLCD2A6NGC4 264 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 LRRC14BA6NHZ5 514 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CDRT15L2A8MXV6 281 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 E5RI56 91 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 POC1B-GALNT4F8VUJ3 575 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 G3V2L1 256 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 MAP2K7O14733 419 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PFDN6O15212 129 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TOX3O15405 576 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TYROBPO43914 113 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CTSVO60911 334 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 KERAO60938 352 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 FZD7O75084 574 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CDH16O75309 829 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CSO75390 466 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 UBXN7O94888 489 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 KLHL2O95198 593 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 MT-CO3P00414 261 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 VIPP01282 170 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PROS1P07225 676 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 C8GP07360 202 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TUBBP07437 444 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SNRPAP09012 282 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ENO2P09104 434 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 MSL3P1P0C860 447 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CCDC166P0CW27 439 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 FGF3P11487 239 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 COL6A2P12110 1019 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PVRP15151 417 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ST6GAL1P15907 406 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 UGT2B7P16662 529 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 NPPBP16860 134 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 STMN1P16949 149 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ZNF20P17024 532 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TYRP1P17643 537 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TFEBP19484 476 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CD22P20273 847 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SDHBP21912 280 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CNTFP26441 200 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 NDUFS1P28331 727 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CRABP2P29373 138 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 PRDX3P30048 256 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ARRB2P32121 409 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 NTF4P34130 210 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SHMT2P34897 504 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ETV4P43268 484 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SLCO1A2P46721 670 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 EIF1AXP47813 144 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 SERPINB8P50452 374 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 RAB28P51157 221 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 DUSP3P51452 185 aaPredicted RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 IL2P60568 153 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ATP6V0D1P61421 351 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TBPL1P62380 186 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 E2F1Q01094 437 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 MPP2Q14168 576 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 CSHL1Q14406 222 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 USP10Q14694 798 aaKnown RBP3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 ARHGAP19Q14CB8 494 aa3.64□□□□□ -1.83
SMARCE1-215ENST00000578995 TGFBIQ15582 683 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms