RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 ALKBH4Q9NXW9 302 aa10.33□□□□□ -0.76
GGA3-206ENST00000578773 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.33□□□□□ -0.76
GGA3-206ENST00000578773 KLF13Q9Y2Y9 288 aaPredicted RBP10.33□□□□□ -0.76
GGA3-206ENST00000578773 FAM169AQ9Y6X4 670 aa10.33□□□□□ -0.76
GGA3-206ENST00000578773 FIGNL2A6NMB9 653 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 RNF223E7ERA6 249 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 SRPX2O60687 465 aaPredicted RBP10.32□□□□□ -0.76
GGA3-206ENST00000578773 NFKB1P19838 968 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 ENDOUP21128 410 aaKnown RBP10.32□□□□□ -0.76
GGA3-206ENST00000578773 HLCSP50747 726 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 MLF1P58340 268 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 SLC26A5P58743 744 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 PPIAP62937 165 aaKnown RBP10.32□□□□□ -0.76
GGA3-206ENST00000578773 TYRO3Q06418 890 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 USP10Q14694 798 aaKnown RBP10.32□□□□□ -0.76
GGA3-206ENST00000578773 SLC1A5Q15758 541 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 FBXL19-AS1Q494R0 122 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 CCSMST1Q4G0I0 132 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 CATSPEREQ5SY80 951 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 RIPPLY2Q5TAB7 128 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 CCDC70Q6NSX1 233 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 ELOA2Q8IYF1 753 aaPredicted RBP10.32□□□□□ -0.76
GGA3-206ENST00000578773 PLD5Q8N7P1 536 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 OR9A4Q8NGU2 314 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 METTL21AQ8WXB1 218 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 FAF2Q96CS3 445 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 SPATA13Q96N96 652 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 CCL19Q99731 98 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 FICDQ9BVA6 458 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 ZDHHC11Q9H8X9 412 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 UBTD1Q9HAC8 227 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 LUC7LQ9NQ29 371 aaKnown RBP10.32□□□□□ -0.76
GGA3-206ENST00000578773 HCN3Q9P1Z3 774 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 SPRR3Q9UBC9 169 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 POLG2Q9UHN1 485 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 HEY1Q9Y5J3 304 aa10.32□□□□□ -0.76
GGA3-206ENST00000578773 MED12LQ86YW9 2145 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 NINQ8N4C6 2090 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 A0A0A6YYK5 440 aaPredicted RBP10.31□□□□□ -0.76
GGA3-206ENST00000578773 SLC5A10A0PJK1 596 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 SOX30O94993 753 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 S1PR4O95977 384 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 FTLP02792 175 aaPredicted RBP10.31□□□□□ -0.76
GGA3-206ENST00000578773 ANXA5P08758 320 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 ERVK-10P10266 1014 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 PTPN3P26045 913 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 SLC14A2Q15849 920 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 EXT1Q16394 746 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 SERPINA9Q86WD7 417 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 CSNK1A1LQ8N752 337 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 IPMKQ8NFU5 416 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 OR2L8Q8NGY9 312 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 ENOX1Q8TC92 643 aaKnown RBP10.31□□□□□ -0.76
GGA3-206ENST00000578773 ELP5Q8TE02 316 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 ELMO1Q92556 727 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 CCDC138Q96M89 665 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 SRPK1Q96SB4 655 aaKnown RBP10.31□□□□□ -0.76
GGA3-206ENST00000578773 INTS7Q9NVH2 962 aaKnown RBP10.31□□□□□ -0.76
GGA3-206ENST00000578773 ZDHHC3Q9NYG2 299 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 C6orf203Q9P0P8 240 aaPredicted RBP10.31□□□□□ -0.76
GGA3-206ENST00000578773 IMPACTQ9P2X3 320 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 B4GALT7Q9UBV7 327 aa10.31□□□□□ -0.76
GGA3-206ENST00000578773 A0A1W2PPV9 198 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 FEZF1A0PJY2 475 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 OR2A25A4D2G3 310 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 SOWAHDA6NJG2 315 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 KLRC4-KLRK1H3BQV0 150 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 BCKDKO14874 412 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 CDC123O75794 336 aaPredicted RBP10.3□□□□□ -0.76
GGA3-206ENST00000578773 AGTP01019 485 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 RALBP11234 206 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 TRHRP34981 398 aaPredicted RBP10.3□□□□□ -0.76
GGA3-206ENST00000578773 SSR1P43307 286 aaKnown RBP10.3□□□□□ -0.76
GGA3-206ENST00000578773 MAGEA5P43359 124 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 ZNF136P52737 540 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 TAS2R40P59535 323 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 CHRFAM7AQ494W8 412 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 TCP11X2Q5H9J9 407 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 E4F1Q66K89 784 aaPredicted RBP10.3□□□□□ -0.76
GGA3-206ENST00000578773 TRILQ7L0X0 811 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 IRF2BP2Q7Z5L9 587 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 PIANPQ8IYJ0 282 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 OR2L3Q8NG85 312 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 CFAP61Q8NHU2 1237 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 LKAAEAR1Q8TD35 194 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 SECISBP2Q96T21 854 aaKnown RBP10.3□□□□□ -0.76
GGA3-206ENST00000578773 APOL2Q9BQE5 337 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 GORASP1Q9BQQ3 440 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 ZNF670Q9BS34 389 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 HACD3Q9P035 362 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 FAM153AQ9UHL3 310 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 CDC14AQ9UNH5 594 aa10.3□□□□□ -0.76
GGA3-206ENST00000578773 KMT2CQ8NEZ4 4911 aaKnown RBP10.3□□□□□ -0.76
GGA3-206ENST00000578773 MALRD1Q5VYJ5 2156 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 IGKV1-8A0A0C4DH67 115 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 GOLGA6L4A6NEF3 574 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 TARM1B6A8C7 271 aa10.29□□□□□ -0.76
GGA3-206ENST00000578773 DDX3XO00571 662 aaKnown RBP eCLIP10.29□□□□□ -0.76
GGA3-206ENST00000578773 LIN7AO14910 233 aaPredicted RBP10.29□□□□□ -0.76
GGA3-206ENST00000578773 IGHG3P01860 377 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 996 ms