RNA–Protein interactions for RNA: ENST00000578044.5

SMARCE1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,184 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-213ENST00000578044 EMP2P54851 167 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 YBX1P67809 324 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 Q0VFX4 171 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 RAPSNQ13702 412 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 ZNF169Q14929 603 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 HSP90AA5PQ58FG0 334 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 UBE2R2Q712K3 238 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 CISD2Q8N5K1 135 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 ABHD11Q8NFV4 315 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 PSMF1Q92530 271 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 TM4SF19Q96DZ7 209 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 SGPP1Q9BX95 441 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 ZNF700Q9H0M5 742 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 CLK4Q9HAZ1 481 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 ZBTB20Q9HC78 741 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 FBXO6Q9NRD1 293 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 TRPC4Q9UBN4 977 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 PLEKHB1Q9UF11 243 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 TRMT6Q9UJA5 497 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 SLC5A6Q9Y289 635 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 MAU2Q9Y6X3 613 aa13.77□□□□□ -0.21
SMARCE1-213ENST00000578044 CACNA1DQ01668 2161 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 IGHV1-45A0A0A0MS14 117 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 NSG1A0A0A6YYJ2 146 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 KRT87PA6NCN2 255 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 ANKUB1A6NFN9 424 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 NRP2O60462 931 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 SEMA7AO75326 666 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 ENO2P09104 434 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 PRR35P0CG20 571 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 EDN3P14138 238 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 IVDP26440 423 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 AVPR1BP47901 424 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 TIAL1Q01085 375 aaKnown RBP eCLIP13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 MORF4L2Q15014 288 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 PPP1R7Q15435 360 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 PRR30Q53SZ7 412 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 VWA2Q5GFL6 755 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 TMEM151BQ8IW70 566 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 PALM2Q8IXS6 379 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 CAMKVQ8NCB2 501 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 DNAJB14Q8TBM8 379 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 FAR1Q8WVX9 515 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 FAM136AQ96C01 138 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 C19orf60Q96EN9 201 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 THOC3Q96J01 351 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 HAUS8Q9BT25 410 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 TUBB6Q9BUF5 446 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 STOX2Q9P2F5 926 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 MRPS2Q9Y399 296 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 PCDHGB6Q9Y5F9 930 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 SLC22A7Q9Y694 548 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 CREBBPQ92793 2442 aa13.76□□□□□ -0.21
SMARCE1-213ENST00000578044 GOLGA8MH3BSY2 632 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 NDC80O14777 642 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 LDLRP01130 860 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 MYBL2P10244 700 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 FOXL2P58012 376 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 TBPL1P62380 186 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 MRPL49Q13405 166 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 ELOAQ14241 798 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 NR6A1Q15406 480 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 HKDC1Q2TB90 917 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 TMEM214Q6NUQ4 689 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 LCTLQ6UWM7 567 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 LAPTM4BQ86VI4 370 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 C17orf64Q86WR6 236 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 CPNE9Q8IYJ1 553 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 PDIK1LQ8N165 341 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 MYO1HQ8N1T3 1032 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 GPATCH11Q8N954 259 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 OR4K1Q8NGD4 311 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 ATL1Q8WXF7 558 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 MMABQ96EY8 250 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 CERS2Q96G23 380 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 IMMP1LQ96LU5 166 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 SLX1AQ9BQ83 275 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 SYNPO2LQ9H987 977 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 PDE10AQ9Y233 779 aa13.75□□□□□ -0.21
SMARCE1-213ENST00000578044 TRAV17A0A0B4J275 112 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 DYTNA2CJ06 578 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 H7BY64 318 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 HAT1O14929 419 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 TSPAN12O95859 305 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 AHSGP02765 367 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 HIST1H2AGP0C0S8 130 aaPredicted RBP13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 HIST1H2ADP20671 130 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 GABRB3P28472 473 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 GRK3P35626 688 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 AGTR2P50052 363 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 IL2P60568 153 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 SKP1P63208 163 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 CSNK1G2P78368 415 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 CUL1Q13616 776 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 EIF2S3LQ2VIR3 472 aaKnown RBP13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 THEMIS2Q5TEJ8 643 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 STEAP4Q687X5 459 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 DUPD1Q68J44 220 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 H3F3CQ6NXT2 135 aa13.74□□□□□ -0.21
SMARCE1-213ENST00000578044 MYO7BQ6PIF6 2116 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms