RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 THAP11Q96EK4 314 aa13.47□□□□□ -0.25
SMARCD2-205ENST00000577686 OR2A5Q96R48 311 aa13.47□□□□□ -0.25
SMARCD2-205ENST00000577686 FAM129AQ9BZQ8 928 aa13.47□□□□□ -0.25
SMARCD2-205ENST00000577686 INTS10Q9NVR2 710 aaKnown RBP13.47□□□□□ -0.25
SMARCD2-205ENST00000577686 KLHL42Q9P2K6 505 aa13.47□□□□□ -0.25
SMARCD2-205ENST00000577686 CROCCQ5TZA2 2017 aa13.47□□□□□ -0.25
SMARCD2-205ENST00000577686 CDK2AP1O14519 115 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 ZBTB14O43829 449 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 KIF5CO60282 957 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 SLC19A2O60779 497 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 NSA2O95478 260 aaKnown RBP13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 F10P00742 488 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 PRF1P14222 555 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 ETS1P14921 441 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 CD46P15529 392 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 RPL22P35268 128 aaKnown RBP13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 RPS15AP62244 130 aaKnown RBP13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 CRADDP78560 199 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 GBX1Q14549 363 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 RPS6KA1Q15418 735 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 KRTCAP3Q53RY4 240 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 PLAG1Q6DJT9 500 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 LRRC8EQ6NSJ5 796 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 CASC4Q6P4E1 433 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 DRICH1Q6PGQ1 229 aaPredicted RBP13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 CPEB2Q7Z5Q1 589 aaKnown RBP13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 BIRC8Q96P09 236 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 PKP4Q99569 1192 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 UTP23Q9BRU9 249 aaKnown RBP13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 KIFC1Q9BW19 673 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 PCBD2Q9H0N5 130 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 KCNK13Q9HB14 408 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 GPAMQ9HCL2 828 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 HOMER3Q9NSC5 361 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 STOX2Q9P2F5 926 aaPredicted RBP13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 SH3BGRL2Q9UJC5 107 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 SOX13Q9UN79 622 aa13.46□□□□□ -0.25
SMARCD2-205ENST00000577686 CCDC88CQ9P219 2028 aa13.46□□□□□ -0.26
SMARCD2-205ENST00000577686 CTAGE9A4FU28 777 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 PABPN1LA6NDY0 278 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 A8MUI8 341 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 FFAR3O14843 346 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 GPR42O15529 346 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 NRP2O60462 931 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 MPC1LP0DKB6 136 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 TPSB2P20231 275 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 IL10P22301 178 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 MGAT1P26572 445 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 EEF1DP29692 281 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 SSTR2P30874 369 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 GRK3P35626 688 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 ALDH6A1Q02252 535 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 THOC5Q13769 683 aaKnown RBP13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 TPSAB1Q15661 275 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 MEP1AQ16819 746 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 ACSBG2Q5FVE4 666 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 SLC5A8Q8N695 610 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 CAMKVQ8NCB2 501 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 GABPB2Q8TAK5 448 aaPredicted RBP13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 THAP3Q8WTV1 239 aaPredicted RBP13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 FAM136AQ96C01 138 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 IMMP1LQ96LU5 166 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 ANKHQ9HCJ1 492 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 CCDC177Q9NQR7 707 aaPredicted RBP13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 ABCF3Q9NUQ8 709 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 TMEM184CQ9NVA4 438 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 CRYL1Q9Y2S2 319 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 COMMD10Q9Y6G5 202 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 CAPN6Q9Y6Q1 641 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 CELSR2Q9HCU4 2923 aa13.45□□□□□ -0.26
SMARCD2-205ENST00000577686 KRT87PA6NCN2 255 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 E7ENX8 843 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 FAM227AF5H4B4 570 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 EIF3FO00303 357 aaPredicted RBP13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 HAT1O14929 419 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 FOXS1O43638 330 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 SNRNP200O75643 2136 aaKnown RBP13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 SEC24DO94855 1032 aaPredicted RBP13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 SLC16A8O95907 504 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 CELA2AP08217 269 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 TAP2Q03519 686 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 ACTN3Q08043 901 aaPredicted RBP13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 ACER2Q5QJU3 275 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 NIPAL1Q6NVV3 410 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 NEPROQ6NW34 567 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 PALM2Q8IXS6 379 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 LMNTD2Q8IXW0 634 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 TBC1D19Q8N5T2 526 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 M1APQ8TC57 530 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 ZNF480Q8WV37 535 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 KCNJ9Q92806 393 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 MFSD3Q96ES6 412 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 LURAP1Q96LR2 239 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 CYTH2Q99418 400 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 MESP1Q9BRJ9 268 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 DESI2Q9BSY9 194 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 VN1R1Q9GZP7 353 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 SYBUQ9NX95 663 aa13.44□□□□□ -0.26
SMARCD2-205ENST00000577686 DIDO1Q9BTC0 2240 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms