RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 KLF1Q13351 362 aaPredicted RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 MRPL49Q13405 166 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 SEMA3AQ14563 771 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 NCF4Q15080 339 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 INPP5JQ15735 1006 aaPredicted RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 KYNUQ16719 465 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 MROH9Q5TGP6 573 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 SPESP1Q6UW49 350 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 PEX26Q7Z412 305 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 LDB1Q86U70 411 aaPredicted RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 TMTC1Q8IUR5 882 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 VRK3Q8IV63 474 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 ZC3H7AQ8IWR0 971 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 CARFQ8N187 725 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 RBMXL3Q8N7X1 1067 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 FLVCR1-AS1Q8TAF5 88 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 SLC35B2Q8TB61 432 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 LKAAEAR1Q8TD35 194 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 HEXDCQ8WVB3 486 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 C19orf60Q96EN9 201 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 ZNF778Q96MU6 729 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 IL17FQ96PD4 163 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 OR2A14Q96R47 310 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 PANX2Q96RD6 677 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 FERMT1Q9BQL6 677 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 NLNQ9BYT8 704 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 SLC7A5P2Q9GIP4 190 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 MVB12BQ9H7P6 319 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 FANCEQ9HB96 536 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 LUC7LQ9NQ29 371 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 DHCR7Q9UBM7 475 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 SERTAD3Q9UJW9 196 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 AMFRQ9UKV5 643 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 VPS4AQ9UN37 437 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 CDYLQ9Y232 598 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 ASF1AQ9Y294 204 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 PCDHGA9Q9Y5G4 932 aaKnown RBP5.99□□□□□ -1.45
NUP88-212ENST00000576708 FLNCQ14315 2725 aa5.99□□□□□ -1.45
NUP88-212ENST00000576708 SLC5A10A0PJK1 596 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 KRT87PA6NCN2 255 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 IQCF5A8MTL0 148 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 BTNL10A8MVZ5 291 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 ISM1B1AKI9 464 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 FAM47E-STBD1D6RA91 191 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 H3BMH7 237 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 MATN2O00339 956 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 ZNF500O60304 480 aaPredicted RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 ALOX12BO75342 701 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 KLF7O75840 302 aaPredicted RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 OR2B3O76000 313 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 SORBS2O94875 1100 aaKnown RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 AP2A2O94973 939 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 AGFG2O95081 481 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 AP2A1O95782 977 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 GOT2P00505 430 aaKnown RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 ZSCAN5DPP0CG00 497 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 CCR7P32248 378 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 SHMT2P34897 504 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 CETN2P41208 172 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 NSG1P42857 185 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 YBX1P67809 324 aaKnown RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 RPA4Q13156 261 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 SNX1Q13596 522 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 EIF2S3LQ2VIR3 472 aaKnown RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 SYTL3Q4VX76 610 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 PAPD7Q5XG87 772 aaKnown RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 JMJD6Q6NYC1 403 aaPredicted RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 ZNF449Q6P9G9 518 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 ZNF534Q76KX8 674 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 KIAA1328Q86T90 577 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 TAX1BP1Q86VP1 789 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 HOOK3Q86VS8 718 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 TMEM139Q8IV31 216 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 KRT222Q8N1A0 295 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 GLIS1Q8NBF1 620 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 OR13J1Q8NGT2 312 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 CFAP61Q8NHU2 1237 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 STYXQ8WUJ0 223 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 SEC14L1Q92503 715 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 HDAC10Q969S8 669 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 PEX11GQ96HA9 241 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 ALS2CR12Q96Q35 445 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 BRINP2Q9C0B6 783 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 LRRC40Q9H9A6 602 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 VPS37BQ9H9H4 285 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 ZBTB20Q9HC78 741 aaPredicted RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 SLC22A11Q9NSA0 550 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 FEZ2Q9UHY8 353 aaPredicted RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 PTRH2Q9Y3E5 179 aaKnown RBP5.98□□□□□ -1.45
NUP88-212ENST00000576708 DOPEY2Q9Y3R5 2298 aa5.98□□□□□ -1.45
NUP88-212ENST00000576708 MED13Q9UHV7 2174 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 UTP20O75691 2785 aaKnown RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 A0A0J9YY10 115 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 TCRBV16S1A1N1A0A5B0 115 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 A1L4Q6 167 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 GOLGA6L9A6NEM1 432 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 TCP11X1B4DZS4 312 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 C9J4A7 227 aa5.97□□□□□ -1.45
NUP88-212ENST00000576708 LIN7AO14910 233 aaPredicted RBP5.97□□□□□ -1.45
NUP88-212ENST00000576708 PSMD3O43242 534 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms