RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 PEX13Q92968 403 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 GTPBP2Q9BX10 602 aaKnown RBP12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 SLC22A14Q9Y267 594 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 NUMBLQ9Y6R0 609 aa12.75□□□□□ -0.37
PCDHGB3-201ENST00000576222 ANKRD66B4E2M5 251 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 HLA-DPB1P04440 258 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 H1F0P07305 194 aaKnown RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 BCKDHAP12694 445 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 RPL4P36578 427 aaKnown RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 SSR2P43308 183 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 RPS24P62847 133 aaKnown RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 HSPB3Q12988 150 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 RCAN2Q14206 197 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 POM121L1PQ3SYA9 428 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 ATXN7L2Q5T6C5 722 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 MOB2Q70IA6 237 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 C17orf64Q86WR6 236 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 TOMM5Q8N4H5 51 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 C1orf52Q8N6N3 182 aaKnown RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 RAET1EQ8TD07 263 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 RAD51AP1Q96B01 352 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZSCAN5AQ9BUG6 496 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 CD244Q9BZW8 370 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 HCN2Q9UL51 889 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 IFNA16P05015 189 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 S100A6P06703 90 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 CPN2P22792 545 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 RGS8P57771 180 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 ABRAXAS2Q15018 415 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 AGAP6Q5VW22 663 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 RANBP10Q6VN20 620 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 TCEANCQ8N8B7 351 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 PTERQ96BW5 349 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 CMTM7Q96FZ5 175 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 MSANTD3Q96H12 275 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 CNDP2Q96KP4 475 aaKnown RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 AGAP4Q96P64 663 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 NLE1Q9NVX2 485 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 PDE4DIPQ5VU43 2346 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 OR1E2P47887 323 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 CLK3P49761 638 aaKnown RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 RPL6Q02878 288 aaKnown RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 PROX2Q3B8N5 592 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 RUNDC3AQ59EK9 446 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 TRNP1Q6NT89 227 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 LRRC70Q7Z2Q7 622 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 GPC2Q8N158 579 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 KLHL36Q8N4N3 616 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 OR5AK3PQ8NH89 298 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 NFKBIDQ8NI38 313 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 HTATIP2Q9BUP3 242 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 PLSCR1O15162 318 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 CRYZL1O95825 349 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 CD247P20963 164 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 HTR1BP28222 390 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 PNLIPRP1P54315 467 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 TMEM44Q2T9K0 475 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 GPR33Q49SQ1 333 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 KIAA1161Q6NSJ0 714 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 SLC30A8Q8IWU4 369 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 AKAP1Q92667 903 aaKnown RBP eCLIP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 C3orf14Q9HBI5 128 aa12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZBTB20Q9HC78 741 aaPredicted RBP12.74□□□□□ -0.37
PCDHGB3-201ENST00000576222 KDM4BO94953 1096 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 IFNGP01579 166 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PFKMP08237 780 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 SMPD1P17405 629 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 GPR1P46091 355 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PITPNAQ00169 270 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 SERINC3Q13530 473 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 LIPKQ5VXJ0 399 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF467Q7Z7K2 595 aaPredicted RBP12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ADGRD2Q7Z7M1 963 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 OOSP2Q86WS3 158 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 TIGD4Q8IY51 512 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PIGKQ92643 395 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 SLA2Q9H6Q3 261 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 EQTNQ9NQ60 294 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 GPR83Q9NYM4 423 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 CROCCQ5TZA2 2017 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ATG13O75143 517 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 RETP07949 1114 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ALDOCP09972 364 aaKnown RBP12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 HNMTP50135 292 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 HTR6P50406 440 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ZNF81P51508 661 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 DSTNP60981 165 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 GRSF1Q12849 480 aaKnown RBP eCLIP12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 RAET1GQ6H3X3 334 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 GJD3Q8N144 294 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 SLC43A3Q8NBI5 491 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 OR10H4Q8NGA5 316 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 TMED9Q9BVK6 235 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 MRPL9Q9BYD2 267 aaKnown RBP12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 RGS17Q9UGC6 210 aaPredicted RBP12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 MLXQ9UH92 298 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PADI3Q9ULW8 664 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ABCG2Q9UNQ0 655 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 ITM2BQ9Y287 266 aa12.73□□□□□ -0.37
PCDHGB3-201ENST00000576222 PCDHGB5Q9Y5G0 923 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms