RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 RERGQ96A58 199 aaPredicted RBP10.56□□□□□ -0.72
CHD3-216ENST00000573936 KIAA1143Q96AT1 154 aaPredicted RBP10.56□□□□□ -0.72
CHD3-216ENST00000573936 CLIP3Q96DZ5 547 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 SCYL1Q96KG9 808 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 ZNF285Q96NJ3 590 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 PRAP1Q96NZ9 151 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 CCNL2Q96S94 520 aaPredicted RBP10.56□□□□□ -0.72
CHD3-216ENST00000573936 DPH2Q9BQC3 489 aaPredicted RBP10.56□□□□□ -0.72
CHD3-216ENST00000573936 NDC1Q9BTX1 674 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 FAM117AQ9C073 453 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 SPRTNQ9H040 489 aaPredicted RBP10.56□□□□□ -0.72
CHD3-216ENST00000573936 PELI2Q9HAT8 420 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 GPRC5BQ9NZH0 403 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 TBK1Q9UHD2 729 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 SLC22A14Q9Y267 594 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 HECTD1Q9ULT8 2610 aa10.56□□□□□ -0.72
CHD3-216ENST00000573936 KCNE1BA0A087WTH5 132 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 FITM1A5D6W6 292 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 H3BMH7 237 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 UBXN8O00124 270 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 MAP2K7O14733 419 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 HAT1O14929 419 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 CLGNO14967 610 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 TAPBPO15533 448 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 SMIM24O75264 130 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 H2AFYO75367 372 aaKnown RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 WISP1O95388 367 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 GSTA1P08263 222 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 PIM1P11309 404 aaPredicted RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 CDH1P12830 882 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 GFAPP14136 432 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 ZNF28P17035 718 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 KRT15P19012 456 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 GNAZP19086 355 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 AGXTP21549 392 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 CXCR2P25025 360 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 GMPRP36959 345 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 GLRBP48167 497 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 KCNC1P48547 511 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 EMP3P54852 163 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 ALDH18A1P54886 795 aaKnown RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 VSX2P58304 361 aaPredicted RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 YBX1P67809 324 aaKnown RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 CSNK1G2P78368 415 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 CDC16Q13042 620 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 ZXDCQ2QGD7 858 aaPredicted RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 TECRLQ5HYJ1 363 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 WASHC2DQ5SRD0 308 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 RHBDD2Q6NTF9 364 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 METTL2BQ6P1Q9 378 aaKnown RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 NXPE4Q6UWF7 544 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 CCDC81Q6ZN84 652 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 LRRC70Q7Z2Q7 622 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 TIPARPQ7Z3E1 657 aaKnown RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 DSELQ8IZU8 1212 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 PLD6Q8N2A8 252 aaKnown RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 GALNT6Q8NCL4 622 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 OR4K1Q8NGD4 311 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 PROKR1Q8TCW9 393 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 EXT2Q93063 718 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 GPR78Q96P69 363 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 OR4K3Q96R72 315 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 C17orf62Q9BQA9 187 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 MRPL57Q9BQC6 102 aaKnown RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 SARGQ9BW04 601 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 NLNQ9BYT8 704 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 CD244Q9BZW8 370 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 MRPL46Q9H2W6 279 aaKnown RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 LHX9Q9NQ69 397 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 TXLNGQ9NUQ3 528 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 PCMTD2Q9NV79 361 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 DNAJC11Q9NVH1 559 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 CUEDC1Q9NWM3 386 aaPredicted RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 DCDC2Q9UHG0 476 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 TNPO3Q9Y5L0 923 aaKnown RBP10.55□□□□□ -0.72
CHD3-216ENST00000573936 COL12A1Q99715 3063 aa10.55□□□□□ -0.72
CHD3-216ENST00000573936 TLDC2A0PJX2 215 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 C21orf140B9A014 251 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 H0YGG7 62 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 PYCARD-AS1I3L0S3 204 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 MEN1O00255 615 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 HCRTR1O43613 425 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 CCNT2O60583 730 aaKnown RBP10.54□□□□□ -0.72
CHD3-216ENST00000573936 EIF2S1P05198 315 aaKnown RBP10.54□□□□□ -0.72
CHD3-216ENST00000573936 CD63P08962 238 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 STAT5AP42229 794 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 SLCO1A2P46721 670 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 HSPA7P48741 367 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 ARF3P61204 181 aaPredicted RBP10.54□□□□□ -0.72
CHD3-216ENST00000573936 TGIF1Q15583 401 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 PDK4Q16654 411 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 NDUFA9Q16795 377 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 PRAMEF17Q5VTA0 474 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 GARNL3Q5VVW2 1013 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 FRMPD2BQ6IN97 320 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 SNX31Q8N9S9 440 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 ZSCAN1Q8NBB4 408 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 CAMKVQ8NCB2 501 aa10.54□□□□□ -0.72
CHD3-216ENST00000573936 UBTD2Q8WUN7 234 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms