RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 FSTP19883 344 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 CMPK1P30085 196 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 HSD17B2P37059 387 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 SKIV2L2P42285 1042 aaKnown RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 CARSP49589 748 aaKnown RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 PMS2P54278 862 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 IL10RAQ13651 578 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 FASTKQ14296 549 aaKnown RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 SSPNQ14714 243 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 CRYMQ14894 314 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 ARHGAP19Q14CB8 494 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 MORF4L2Q15014 288 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 NCF4Q15080 339 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 FAM214AQ32MH5 1076 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 BBS9Q3SYG4 887 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 NKAIN1Q4KMZ8 207 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 LACTB2Q53H82 288 aaPredicted RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 TCTE1Q5JU00 501 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 SPANXN3Q5MJ09 141 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 WIPI1Q5MNZ9 446 aaPredicted RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 WASHC2DQ5SRD0 308 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 FAM69BQ5VUD6 431 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 UGT3A1Q6NUS8 523 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 FBXO42Q6P3S6 717 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 FAM198BQ6UWH4 519 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 SUSD1Q6UWL2 747 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 TTLL10Q6ZVT0 673 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 MED25Q71SY5 747 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 PDIK1LQ8N165 341 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 OR2L3Q8NG85 312 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 PROKR1Q8TCW9 393 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 ADAMTS17Q8TE56 1095 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 ASB11Q8WXH4 323 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 DLG3Q92796 817 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 KCNJ9Q92806 393 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 PTERQ96BW5 349 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 PLPPR2Q96GM1 343 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 GBP5Q96PP8 586 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 PKP4Q99569 1192 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 GPR21Q99679 349 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 MIPEPQ99797 713 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 FAM167BQ9BTA0 163 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 NAT9Q9BTE0 207 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 ING2Q9H160 280 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 ACSS2Q9NR19 701 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 FAM114A2Q9NRY5 505 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 SPATA7Q9P0W8 599 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 IFT80Q9P2H3 777 aaPredicted RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 RNF14Q9UBS8 474 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 NDOR1Q9UHB4 597 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 PYCARDQ9ULZ3 195 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 TP53TG5Q9Y2B4 290 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 PADI2Q9Y2J8 665 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 MED16Q9Y2X0 877 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 POLR3KQ9Y2Y1 108 aaPredicted RBP7.12□□□□□ -1.27
NUP88-205ENST00000572809 ZNF462Q96JM2 2506 aa7.12□□□□□ -1.27
NUP88-205ENST00000572809 GCN1Q92616 2671 aaKnown RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 A0A0J9YVX5 310 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 ZNF839A8K0R7 811 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 ARHGEF33A8MVX0 844 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 CCDC188H7C350 402 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 PYCARD-AS1I3L0S3 204 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 GFYI3L273 518 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 K7EM74 188 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 MYO1CO00159 1063 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 CTSVO60911 334 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 BANF1O75531 89 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 DNAJB5O75953 348 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 SYF2O95926 243 aaKnown RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 AHSGP02765 367 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 ERGP11308 486 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 PIM1P11309 404 aaPredicted RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 ENO3P13929 434 aaPredicted RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 NR1D1P20393 614 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 PSMB5P28074 263 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 RPA3P35244 121 aaPredicted RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 FOLR3P41439 243 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 ELK3P41970 407 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 CD97P48960 835 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 PNLIPRP1P54315 467 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 VSX2P58304 361 aaPredicted RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 YBX1P67809 324 aaKnown RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 MPP1Q00013 466 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 DR1Q01658 176 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 PRDX1Q06830 199 aaKnown RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 KLRB1Q12918 225 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 CUL1Q13616 776 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 TSTA3Q13630 321 aaPredicted RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 GRM7Q14831 915 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 NAA25Q14CX7 972 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 YOD1Q5VVQ6 348 aaPredicted RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 FRMPD2BQ6IN97 320 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 HIBCHQ6NVY1 386 aaPredicted RBP7.11□□□□□ -1.27
NUP88-205ENST00000572809 LRFN4Q6PJG9 635 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 ASB18Q6ZVZ8 466 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 OVCH1Q7RTY7 1134 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 RAB43Q86YS6 212 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 IGDCC3Q8IVU1 814 aa7.11□□□□□ -1.27
NUP88-205ENST00000572809 TTC29Q8NA56 475 aaPredicted RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms