RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.75■□□□□ 0.59
CCDC40-206ENST00000572083 H3F3CQ6NXT2 135 aa18.75■□□□□ 0.59
CCDC40-206ENST00000572083 GALNTL5Q7Z4T8 443 aa18.75■□□□□ 0.59
CCDC40-206ENST00000572083 OR9A4Q8NGU2 314 aa18.75■□□□□ 0.59
CCDC40-206ENST00000572083 FAM136AQ96C01 138 aa18.75■□□□□ 0.59
CCDC40-206ENST00000572083 CYTH2Q99418 400 aa18.75■□□□□ 0.59
CCDC40-206ENST00000572083 TRIM51Q9BSJ1 452 aa18.75■□□□□ 0.59
CCDC40-206ENST00000572083 C19orf25Q9UFG5 118 aaPredicted RBP18.75■□□□□ 0.59
CCDC40-206ENST00000572083 NIPBLQ6KC79 2804 aaeCLIP18.75■□□□□ 0.59
CCDC40-206ENST00000572083 OR2W5A6NFC9 320 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 ERI2A8K979 691 aaKnown RBP18.74■□□□□ 0.59
CCDC40-206ENST00000572083 KPNA5O15131 536 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 CD3EAPO15446 510 aaKnown RBP18.74■□□□□ 0.59
CCDC40-206ENST00000572083 ASNA1O43681 348 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 ERGP11308 486 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 EZRP15311 586 aaKnown RBP18.74■□□□□ 0.59
CCDC40-206ENST00000572083 CD46P15529 392 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 CD1EP15812 388 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 AVPR1BP47901 424 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 NAP1L1P55209 391 aaKnown RBP18.74■□□□□ 0.59
CCDC40-206ENST00000572083 EIF3BP55884 814 aaKnown RBP18.74■□□□□ 0.59
CCDC40-206ENST00000572083 SPA17Q15506 151 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 MEP1AQ16819 746 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 CTSL3PQ5NE16 218 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 ICE2Q659A1 982 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 ZNF425Q6IV72 752 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 PRSS41Q7RTY9 318 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 ADCK2Q7Z695 626 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.74■□□□□ 0.59
CCDC40-206ENST00000572083 DOLPP1Q86YN1 238 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 PLD3Q8IV08 490 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 CHERPQ8IWX8 916 aaKnown RBP18.74■□□□□ 0.59
CCDC40-206ENST00000572083 GHDCQ8N2G8 530 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 TMEM178AQ8NBL3 297 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 OR9A1PQ8NGU1 263 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 SLC35B2Q8TB61 432 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 PHF10Q8WUB8 498 aaKnown RBP18.74■□□□□ 0.59
CCDC40-206ENST00000572083 SMPDL3AQ92484 453 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 DMRTA2Q96SC8 542 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 TREX2Q9BQ50 279 aaPredicted RBP18.74■□□□□ 0.59
CCDC40-206ENST00000572083 ETNK1Q9HBU6 452 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 ABCF3Q9NUQ8 709 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 PPT2Q9UMR5 302 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 DUSP10Q9Y6W6 482 aa18.74■□□□□ 0.59
CCDC40-206ENST00000572083 HEATR5BQ9P2D3 2071 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 ARHGEF33A8MVX0 844 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 E9PLN8 166 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 ADAM10O14672 748 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 HAT1O14929 419 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 SUN1O94901 812 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 NADKO95544 446 aaPredicted RBP18.73■□□□□ 0.59
CCDC40-206ENST00000572083 TSPAN12O95859 305 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 ART1P52961 327 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 OC90Q02509 493 aaPredicted RBP18.73■□□□□ 0.59
CCDC40-206ENST00000572083 KLF1Q13351 362 aaPredicted RBP18.73■□□□□ 0.59
CCDC40-206ENST00000572083 ANKRD37Q7Z713 158 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 PPFIBP2Q8ND30 876 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 PPHLN1Q8NEY8 458 aaKnown RBP18.73■□□□□ 0.59
CCDC40-206ENST00000572083 VKORC1Q9BQB6 163 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 CHRAC1Q9NRG0 131 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 HCN3Q9P1Z3 774 aa18.73■□□□□ 0.59
CCDC40-206ENST00000572083 TCRBV7S2A1N4TA0A589 114 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 GABRR3A8MPY1 467 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 E7EVH7 732 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 NDUFS3O75489 264 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 MATN4O95460 622 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 PKMP14618 531 aaKnown RBP18.72■□□□□ 0.59
CCDC40-206ENST00000572083 RPS3P23396 243 aaKnown RBP eCLIP18.72■□□□□ 0.59
CCDC40-206ENST00000572083 TBX2Q13207 712 aaPredicted RBP18.72■□□□□ 0.59
CCDC40-206ENST00000572083 FAM53BQ14153 422 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 NDUFA9Q16795 377 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 ANKRD20A4Q4UJ75 823 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 FGD2Q7Z6J4 655 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 TC2NQ8N9U0 490 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 FAM98AQ8NCA5 519 aaKnown RBP18.72■□□□□ 0.59
CCDC40-206ENST00000572083 ATG4AQ8WYN0 398 aa18.72■□□□□ 0.59
CCDC40-206ENST00000572083 TXNDC9O14530 226 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 PRRG2O14669 202 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 NIPSNAP2O75323 286 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 NEURL1O76050 574 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 ZNF24P17028 368 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 XCR1P46094 333 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 PRDX1Q06830 199 aaKnown RBP18.71■□□□□ 0.59
CCDC40-206ENST00000572083 RNFT1Q5M7Z0 435 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 LRRC6Q86X45 466 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 CPSF7Q8N684 471 aaKnown RBP18.71■□□□□ 0.59
CCDC40-206ENST00000572083 OTUD6BQ8N6M0 293 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 OR51Q1Q8NH59 317 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 PEX13Q92968 403 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 UTP6Q9NYH9 597 aaKnown RBP18.71■□□□□ 0.59
CCDC40-206ENST00000572083 COQ3Q9NZJ6 369 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 PACSIN2Q9UNF0 486 aaPredicted RBP18.71■□□□□ 0.59
CCDC40-206ENST00000572083 ASB1Q9Y576 335 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 GTF3C1Q12789 2109 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 SPG11Q96JI7 2443 aa18.71■□□□□ 0.59
CCDC40-206ENST00000572083 SOWAHDA6NJG2 315 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 H0YIG0 161 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 MYO1CO00159 1063 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 CCNDBP1O95273 360 aa18.7■□□□□ 0.58
CCDC40-206ENST00000572083 IFNB1P01574 187 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms