RNA–Protein interactions for RNA: ENST00000571456.1

VPS53-210, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 3

Gene VPS53, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-210ENST00000571456 FGF21Q9NSA1 209 aa19.75■□□□□ 0.75
VPS53-210ENST00000571456 DNAJC11Q9NVH1 559 aa19.75■□□□□ 0.75
VPS53-210ENST00000571456 OCIAD1Q9NX40 245 aa19.75■□□□□ 0.75
VPS53-210ENST00000571456 PISDQ9UG56 409 aa19.75■□□□□ 0.75
VPS53-210ENST00000571456 SERTAD3Q9UJW9 196 aa19.75■□□□□ 0.75
VPS53-210ENST00000571456 ACSL6Q9UKU0 697 aa19.75■□□□□ 0.75
VPS53-210ENST00000571456 PLCL2Q9UPR0 1127 aa19.75■□□□□ 0.75
VPS53-210ENST00000571456 ACTL7BQ9Y614 415 aa19.75■□□□□ 0.75
VPS53-210ENST00000571456 A0A1W2PNU3 283 aaPredicted RBP19.74■□□□□ 0.75
VPS53-210ENST00000571456 NCF1BA6NI72 391 aaPredicted RBP19.74■□□□□ 0.75
VPS53-210ENST00000571456 NCF1CA8MVU1 366 aaPredicted RBP19.74■□□□□ 0.75
VPS53-210ENST00000571456 GOLGA8RI6L899 631 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 UBXN8O00124 270 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 WDR47O94967 919 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 TNFSF15O95150 251 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 NCF1P14598 390 aaPredicted RBP19.74■□□□□ 0.75
VPS53-210ENST00000571456 CXCR2P25025 360 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 PSMB5P28074 263 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 FOXM1Q08050 763 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 CDC16Q13042 620 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 PCBP2Q15366 365 aaKnown RBP eCLIP19.74■□□□□ 0.75
VPS53-210ENST00000571456 TCTE1Q5JU00 501 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 HDXQ7Z353 690 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 TRIM73Q86UV7 250 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 SLC22A9Q8IVM8 553 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 DNAJC22Q8N4W6 341 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 SLC5A11Q8WWX8 675 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 EXT2Q93063 718 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 PRR11Q96HE9 360 aaPredicted RBP19.74■□□□□ 0.75
VPS53-210ENST00000571456 APOPT1Q96IL0 206 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 PPM1MQ96MI6 270 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 OR6C1Q96RD1 312 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 EHD1Q9H4M9 534 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 VIPAS39Q9H9C1 493 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 PELI2Q9HAT8 420 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 SSU72Q9NP77 194 aaKnown RBP19.74■□□□□ 0.75
VPS53-210ENST00000571456 SLC22A14Q9Y267 594 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 ICE1Q9Y2F5 2266 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 ITPR2Q14571 2701 aa19.74■□□□□ 0.75
VPS53-210ENST00000571456 CDRT15L2A8MXV6 281 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 TXNDC9O14530 226 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 TAPBPO15533 448 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 KATNA1O75449 491 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 ITGB2P05107 769 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 EBLN1P0CF75 366 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 SFTPCP11686 197 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 CCL4P13236 92 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 PVRP15151 417 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 GMPRP36959 345 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 CCR8P51685 355 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 TLE1Q04724 770 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 ZXDCQ2QGD7 858 aaPredicted RBP19.73■□□□□ 0.75
VPS53-210ENST00000571456 FCRL6Q6DN72 434 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 RNF44Q7L0R7 432 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 PAQR7Q86WK9 346 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 GPR135Q8IZ08 494 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 EXTL1Q92935 676 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 PYCR2Q96C36 320 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 ZFYVE21Q9BQ24 234 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 TMEM79Q9BSE2 394 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 SARGQ9BW04 601 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 ZNF358Q9NW07 568 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 TMEM216Q9P0N5 145 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 CPSF2Q9P2I0 782 aaKnown RBP19.73■□□□□ 0.75
VPS53-210ENST00000571456 OPTCQ9UBM4 332 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 AP1M2Q9Y6Q5 423 aa19.73■□□□□ 0.75
VPS53-210ENST00000571456 MDC1Q14676 2089 aaKnown RBP19.72■□□□□ 0.75
VPS53-210ENST00000571456 K7EPI3 171 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 EFSO43281 561 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 HBQ1P09105 142 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 FOLR1P15328 257 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 GSTM2P28161 218 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 MAPK10P53779 464 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 RPS15AP62244 130 aaKnown RBP19.72■□□□□ 0.75
VPS53-210ENST00000571456 PCDH1Q08174 1060 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 PDK4Q16654 411 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 PFKFB4Q16877 469 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 TNFAIP8L3Q5GJ75 292 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 DOPEY1Q5JWR5 2465 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 YOD1Q5VVQ6 348 aaPredicted RBP19.72■□□□□ 0.75
VPS53-210ENST00000571456 TLDC1Q6P9B6 456 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 FOXR1Q6PIV2 292 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 CDHR3Q6ZTQ4 885 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 SRRM1Q8IYB3 904 aaKnown RBP19.72■□□□□ 0.75
VPS53-210ENST00000571456 OR4K1Q8NGD4 311 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 ZNF501Q96CX3 271 aaPredicted RBP19.72■□□□□ 0.75
VPS53-210ENST00000571456 SEC16BQ96JE7 1060 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 OR4K3Q96R72 315 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 SLC6A20Q9NP91 592 aa19.72■□□□□ 0.75
VPS53-210ENST00000571456 ABCA12Q86UK0 2595 aa19.71■□□□□ 0.75
VPS53-210ENST00000571456 KCNE1BA0A087WTH5 132 aa19.71■□□□□ 0.75
VPS53-210ENST00000571456 IQCJ-SCHIP1C9J366 451 aaPredicted RBP19.71■□□□□ 0.75
VPS53-210ENST00000571456 CLGNO14967 610 aa19.71■□□□□ 0.75
VPS53-210ENST00000571456 H2AFYO75367 372 aaKnown RBP19.71■□□□□ 0.75
VPS53-210ENST00000571456 HGFP14210 728 aa19.71■□□□□ 0.75
VPS53-210ENST00000571456 EPB42P16452 691 aa19.71■□□□□ 0.75
VPS53-210ENST00000571456 ITIH1P19827 911 aa19.71■□□□□ 0.75
VPS53-210ENST00000571456 ATP5F1P24539 256 aaPredicted RBP19.71■□□□□ 0.75
VPS53-210ENST00000571456 GABRA4P48169 554 aa19.71■□□□□ 0.75
VPS53-210ENST00000571456 HSPA7P48741 367 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms