RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 MAU2Q9Y6X3 613 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 COLEC10Q9Y6Z7 277 aa6.52□□□□□ -1.37
CHD3-213ENST00000571249 A0A087X0T9 212 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 A0A0A6YYK5 440 aaPredicted RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 F8VZ95 297 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 EEF2KO00418 725 aaKnown RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 TFECO14948 347 aaPredicted RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 DSCR3O14972 297 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 DAPK3O43293 454 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 MAN1A2O60476 641 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 MT-CYBP00156 380 aaPredicted RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 PRLP01236 227 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 ZGLP1P0C6A0 271 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 CCDC172P0C7W6 258 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 FAM228BP0C875 321 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 PNMA6AP0CW24 399 aaPredicted RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 TFEBP19484 476 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 UGT1A1P22309 533 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 EMP2P54851 167 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 AP2B1P63010 937 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 APBA1Q02410 837 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 OC90Q02509 493 aaPredicted RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 PLAURQ03405 335 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 OCA2Q04671 838 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 IHHQ14623 411 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 ACER2Q5QJU3 275 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 C6orf52Q5T4I8 152 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 METRNLQ641Q3 311 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 NXNQ6DKJ4 435 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 ACAD10Q6JQN1 1059 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 SPESP1Q6UW49 350 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 KDELC1Q6UW63 502 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 UNC5DQ6UXZ4 953 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 ZNF572Q7Z3I7 529 aaPredicted RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 ZNF571Q7Z3V5 609 aaPredicted RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 STRA8Q7Z7C7 330 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 DAAM2Q86T65 1068 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 DNAJC22Q8N4W6 341 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 C3orf56Q8N813 242 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 CEP112Q8N8E3 955 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 RELL2Q8NC24 303 aaPredicted RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 ACVR1CQ8NER5 493 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 SLC30A5Q8TAD4 765 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 GDAP1Q8TB36 358 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 DENND1AQ8TEH3 1009 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 CPA5Q8WXQ8 436 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 EID2BQ96D98 161 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 FAM81BQ96LP2 452 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 ZNF354BQ96LW1 612 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 TTC25Q96NG3 672 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 OLFM1Q99784 485 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 CARD6Q9BX69 1037 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 XKR8Q9H6D3 395 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 TIMMDC1Q9NPL8 285 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 CUTCQ9NTM9 273 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 EURLQ9NYK6 297 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 DNAJC12Q9UKB3 198 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 TMPRSS11EQ9UL52 423 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 GUCA1BQ9UMX6 200 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 POLR3KQ9Y2Y1 108 aaPredicted RBP6.51□□□□□ -1.37
CHD3-213ENST00000571249 JRKLQ9Y4A0 524 aa6.51□□□□□ -1.37
CHD3-213ENST00000571249 A0A1W2PQ72 361 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 NPIPA2E9PIF3 369 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 NPIPA3F8WFD2 350 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 FOXN3O00409 490 aaPredicted RBP6.5□□□□□ -1.37
CHD3-213ENST00000571249 DDX3XO00571 662 aaKnown RBP eCLIP6.5□□□□□ -1.37
CHD3-213ENST00000571249 HS6ST1O60243 411 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 NEURL1O76050 574 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 SUN1O94901 812 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 ICAM2P13598 275 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 H2AFXP16104 143 aaPredicted RBP6.5□□□□□ -1.37
CHD3-213ENST00000571249 ERCC2P18074 760 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 ACVR2AP27037 513 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 HTR7P34969 479 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 MMP13P45452 471 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 ACKR1Q16570 336 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 HYAL4Q2M3T9 481 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 CMPK2Q5EBM0 449 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 WIPI1Q5MNZ9 446 aaPredicted RBP6.5□□□□□ -1.37
CHD3-213ENST00000571249 SAMD5Q5TGI4 173 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 MARC1Q5VT66 337 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 TAF3Q5VWG9 929 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 LIPNQ5VXI9 398 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 PDPK2PQ6A1A2 396 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 ZNF585AQ6P3V2 769 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 ARHGAP11AQ6P4F7 1023 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 TMEM220Q6QAJ8 160 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 UNC5AQ6ZN44 842 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 AMIGO1Q86WK6 493 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 SLC13A5Q86YT5 568 aaPredicted RBP6.5□□□□□ -1.37
CHD3-213ENST00000571249 ADGRF3Q8IZF5 1079 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 MEIOBQ8N635 442 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 BEND7Q8N7W2 519 aaPredicted RBP6.5□□□□□ -1.37
CHD3-213ENST00000571249 RASGEF1AQ8N9B8 481 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 MSANTD4Q8NCY6 345 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 MNS1Q8NEH6 495 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 RNASE6Q93091 150 aaKnown RBP6.5□□□□□ -1.37
CHD3-213ENST00000571249 IMMP1LQ96LU5 166 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 RMDN2Q96LZ7 410 aa6.5□□□□□ -1.37
CHD3-213ENST00000571249 CLUHP3Q96NS8 147 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms