RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CLEC18BQ6UXF7 455 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 CNTN4Q8IWV2 1026 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 KLHL7Q8IXQ5 586 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 IQCKQ8N0W5 287 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 ZADH2Q8N4Q0 377 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 CLEC18CQ8NCF0 446 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 OR11G2Q8NGC1 345 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 LINGO1Q96FE5 620 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 CERS2Q96G23 380 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 CFAP36Q96G28 342 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 OR2A5Q96R48 311 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 YIPF2Q9BWQ6 316 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 DRC3Q9H069 523 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 PCBD2Q9H0N5 130 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 C14orf105Q9NVL8 296 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 CUEDC1Q9NWM3 386 aaPredicted RBP11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 TRPC4Q9UBN4 977 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 C3orf18Q9UK00 162 aa11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 USP9XQ93008 2570 aaPredicted RBP11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 SNRNP200O75643 2136 aaKnown RBP11.77□□□□□ -0.53
CTDNEP1-205ENST00000570828 IGLV3-12A0A075B6K2 115 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 H7BY64 318 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 HRH2P25021 359 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 MMP16P51512 607 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 CDKN2DP55273 166 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 HIF1AQ16665 826 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 NDUFA9Q16795 377 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 RBM20Q5T481 1227 aaKnown RBP11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 AGAP7PQ5VUJ5 663 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 PAQR3Q6TCH7 311 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 PLD3Q8IV08 490 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 LRRC56Q8IYG6 542 aaPredicted RBP11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 GPATCH11Q8N954 259 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 EEF1AKMT1Q8WVE0 214 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 MMABQ96EY8 250 aaPredicted RBP11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 CCDC138Q96M89 665 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 PRAP1Q96NZ9 151 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 AGAP4Q96P64 663 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 NAPGQ99747 312 aaPredicted RBP11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 WDR77Q9BQA1 342 aaPredicted RBP11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 LHPPQ9H008 270 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 SYNPO2LQ9H987 977 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 PARVBQ9HBI1 364 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 ADAMTS6Q9UKP5 1117 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 CHMP2BQ9UQN3 213 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 PDE10AQ9Y233 779 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 SAR1BQ9Y6B6 198 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 MED13Q9UHV7 2174 aa11.76□□□□□ -0.53
CTDNEP1-205ENST00000570828 SLC16A5O15375 505 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 P2RX6O15547 441 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 AGFG2O95081 481 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 HPP00738 406 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 AHSGP02765 367 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 HIST1H2AGP0C0S8 130 aaPredicted RBP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 HIST1H2ADP20671 130 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 CCND1P24385 295 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 IVDP26440 423 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 GABRB3P28472 473 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 GMPRP36959 345 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 ELK3P41970 407 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 PAFAH1B1P43034 410 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 ARL4CP56559 192 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 IL2P60568 153 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 RPS15AP62244 130 aaKnown RBP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 TIAL1Q01085 375 aaKnown RBP eCLIP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 PLEKHN1Q494U1 663 aaPredicted RBP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 VWA2Q5GFL6 755 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 HP1BP3Q5SSJ5 553 aaPredicted RBP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 FHL5Q5TD97 284 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 MBOAT1Q6ZNC8 495 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 GALNT7Q86SF2 657 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 CREG2Q8IUH2 290 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 IGDCC3Q8IVU1 814 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 ALKBH8Q96BT7 664 aaKnown RBP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 C8orf44Q96CB5 159 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 LRRC39Q96DD0 335 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 SNF8Q96H20 258 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 THOC3Q96J01 351 aaKnown RBP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 HIST1H2AHQ96KK5 128 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 HIST1H2AJQ99878 128 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 H2AFJQ9BTM1 129 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 EPS8L2Q9H6S3 715 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 ZNF160Q9HCG1 818 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 MKKSQ9NPJ1 570 aaPredicted RBP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 TMEM184CQ9NVA4 438 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 SLC17A6Q9P2U8 582 aa11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 CORO1CQ9ULV4 474 aaPredicted RBP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 TNRC6AQ8NDV7 1962 aaKnown RBP11.75□□□□□ -0.53
CTDNEP1-205ENST00000570828 USP9YO00507 2555 aaPredicted RBP11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 SPTAN1Q13813 2472 aaKnown RBP11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 A0A0A6YYC8 382 aaPredicted RBP11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 NSG1A0A0A6YYJ2 146 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 IDSB3KWA1 339 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 CCDC188H7C350 402 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 I3L1I5 382 aaPredicted RBP11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 FFAR3O14843 346 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 GPR42O15529 346 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 SEC31AO94979 1220 aaKnown RBP11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 HEXBP07686 556 aa11.74□□□□□ -0.53
CTDNEP1-205ENST00000570828 CXCR2P25025 360 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms