RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 NEK5Q6P3R8 708 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 DDX53Q86TM3 631 aaKnown RBP14.83□□□□□ -0.04
USP43-202ENST00000570475 AKAP14Q86UN6 197 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 NAGSQ8N159 534 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 LILRA3Q8N6C8 439 aaPredicted RBP14.83□□□□□ -0.04
USP43-202ENST00000570475 OR10G2Q8NGC3 310 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 OR9Q2Q8NGE9 314 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 WDR36Q8NI36 951 aaKnown RBP14.83□□□□□ -0.04
USP43-202ENST00000570475 PIH1D2Q8WWB5 315 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 DNASE1L2Q92874 299 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 RDH12Q96NR8 316 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 TRIT1Q9H3H1 467 aaKnown RBP14.83□□□□□ -0.04
USP43-202ENST00000570475 TM9SF3Q9HD45 589 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 ACOT13Q9NPJ3 140 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 YIPF1Q9Y548 306 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 PCDHGA12O60330 932 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 RETP07949 1114 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 FEN1P39748 380 aaKnown RBP14.83□□□□□ -0.04
USP43-202ENST00000570475 COPZ1P61923 177 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 TPRG1LQ5T0D9 272 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 GPRC6AQ5T6X5 926 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 SHQ1Q6PI26 577 aaKnown RBP14.83□□□□□ -0.04
USP43-202ENST00000570475 TRMT11Q7Z4G4 463 aaKnown RBP14.83□□□□□ -0.04
USP43-202ENST00000570475 ADCK2Q7Z695 626 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 BBS7Q8IWZ6 715 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 LGI4Q8N135 537 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 SLC5A8Q8N695 610 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 FAM83FQ8NEG4 500 aaPredicted RBP14.83□□□□□ -0.04
USP43-202ENST00000570475 PHF10Q8WUB8 498 aaKnown RBP14.83□□□□□ -0.04
USP43-202ENST00000570475 ZFYVE19Q96K21 471 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 CNPPD1Q9BV87 410 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 OR51B5Q9H339 312 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 ERVK13-1Q9NX77 482 aa14.83□□□□□ -0.04
USP43-202ENST00000570475 APOL3O95236 402 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 CKMT1AP12532 417 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 LIPAP38571 399 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 MAD2L1BPQ15013 274 aaPredicted RBP14.82□□□□□ -0.04
USP43-202ENST00000570475 SORCS1Q8WY21 1168 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 TMEM203Q969S6 136 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 TADA1Q96BN2 335 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 HTATIP2Q9BUP3 242 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 NDEL1Q9GZM8 345 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 MARCH5Q9NX47 278 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 PLXNB2O15031 1838 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 PIKFYVEQ9Y2I7 2098 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 A0A0G2JMZ2 1700 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 LRRC37A2A6NM11 1700 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 FAM220BPB1ANY3 271 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 NEDD8-MDP1E9PL57 170 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 LOC110117498-PIK3R3F6TDL0 507 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 H3BNC9 293 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 ADAMTS4O75173 837 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 JUNBP17275 347 aaPredicted RBP14.82□□□□□ -0.04
USP43-202ENST00000570475 PRPS1L1P21108 318 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 SNRPD1P62314 119 aaKnown RBP14.82□□□□□ -0.04
USP43-202ENST00000570475 RPS26P62854 115 aaKnown RBP14.82□□□□□ -0.04
USP43-202ENST00000570475 PLEKHG7Q6ZR37 379 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 PTCHD4Q6ZW05 846 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 ARMC8Q8IUR7 673 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 GPR65Q8IYL9 337 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 SLC34A3Q8N130 599 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 PLD4Q96BZ4 506 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 OTUB1Q96FW1 271 aaPredicted RBP14.82□□□□□ -0.04
USP43-202ENST00000570475 ITPAQ9BY32 194 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 MIEF1Q9NQG6 463 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 ZNF639Q9UID6 485 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 RIMKLBQ9ULI2 386 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 A0A0G2JN53 185 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 TRIM64CA6NLI5 447 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 PDZK1P1A8MUH7 402 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 E7EQ34 232 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 J3KTA2 159 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 WNT9AO14904 365 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 TLL1O43897 1013 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 IGLV3-27P01718 113 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 MC1RQ01726 317 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 ST3GAL4Q11206 333 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 ARMC4Q5T2S8 1044 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 ARTNQ5T4W7 220 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 IRAK1BP1Q5VVH5 260 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 CRTC1Q6UUV9 634 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 TRAPPC5Q8IUR0 188 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 NFKBIDQ8NI38 313 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 BCL7CQ8WUZ0 217 aaPredicted RBP14.82□□□□□ -0.04
USP43-202ENST00000570475 IL1RAPQ9NPH3 570 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 SIRT5Q9NXA8 310 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 B4GALT6Q9UBX8 382 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 TRPS1Q9UHF7 1281 aa14.82□□□□□ -0.04
USP43-202ENST00000570475 ANKDD1BA6NHY2 528 aa14.81□□□□□ -0.04
USP43-202ENST00000570475 PCDH7O60245 1069 aa14.81□□□□□ -0.04
USP43-202ENST00000570475 CCNKO75909 580 aa14.81□□□□□ -0.04
USP43-202ENST00000570475 DEFA1P59665 94 aa14.81□□□□□ -0.04
USP43-202ENST00000570475 DEFA3P59666 94 aa14.81□□□□□ -0.04
USP43-202ENST00000570475 ELP6Q0PNE2 266 aa14.81□□□□□ -0.04
USP43-202ENST00000570475 TNFAIP8L2Q6P589 184 aaPredicted RBP14.81□□□□□ -0.04
USP43-202ENST00000570475 MYDGFQ969H8 173 aa14.81□□□□□ -0.04
USP43-202ENST00000570475 FOPNLQ96NB1 174 aa14.81□□□□□ -0.04
USP43-202ENST00000570475 WRAP53Q9BUR4 548 aaKnown RBP14.81□□□□□ -0.04
USP43-202ENST00000570475 C1QTNF3Q9BXJ4 246 aa14.81□□□□□ -0.04
USP43-202ENST00000570475 CCNB1IP1Q9NPC3 277 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms