RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 NPPBP16860 134 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 STX2P32856 288 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 SLC12A2P55011 1212 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 RPS15AP62244 130 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 SNRPNP63162 240 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 USP10Q14694 798 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 EFTUD2Q15029 972 aaKnown RBP eCLIP12.41□□□□□ -0.421e-11■□□□□ 10
CNOT1-220ENST00000569916 TSNQ15631 228 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 ZKSCAN8Q15776 578 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 GARNL3Q5VVW2 1013 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 MED25Q71SY5 747 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 PPM1NQ8N819 430 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 TMEM102Q8N9M5 508 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 FBF1Q8TES7 1133 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 ATL1Q8WXF7 558 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 MVB12AQ96EY5 273 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 TSPAN17Q96FV3 270 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 HAUS8Q9BT25 410 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 SOX17Q9H6I2 414 aaPredicted RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 CTNNAL1Q9UBT7 734 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 DMGDHQ9UI17 866 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 NXT1Q9UKK6 140 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 MRPS2Q9Y399 296 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 OARD1Q9Y530 152 aa12.41□□□□□ -0.42
CNOT1-220ENST00000569916 PCDHGA9Q9Y5G4 932 aaKnown RBP12.41□□□□□ -0.42
CNOT1-220ENST00000569916 IGLV3-12A0A075B6K2 115 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 KCNE1BA0A087WTH5 132 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 FEZF1A0PJY2 475 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 VSTM2BA6NLU5 285 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 TXNDC9O14530 226 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 FOXS1O43638 330 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 FAM155BO75949 473 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 STATHP02808 62 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 FBLP22087 321 aaKnown RBP12.4□□□□□ -0.42
CNOT1-220ENST00000569916 MMP11P24347 488 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 BCL6P41182 706 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 CCL11P51671 97 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 RRADP55042 308 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 CDKL1Q00532 357 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 NAB1Q13506 487 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 DSG2Q14126 1118 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 UBAP2Q5T6F2 1119 aaKnown RBP12.4□□□□□ -0.42
CNOT1-220ENST00000569916 GRTP1Q5TC63 336 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 SHISA6Q6ZSJ9 500 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 ADAMTSL2Q86TH1 951 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 AMER3Q8N944 861 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 MNS1Q8NEH6 495 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 ABHD11Q8NFV4 315 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 COL26A1Q96A83 441 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 SLC25A23Q9BV35 468 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 UNKQ9C0B0 810 aaKnown RBP12.4□□□□□ -0.42
CNOT1-220ENST00000569916 DERL2Q9GZP9 239 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 MLXIPLQ9NP71 852 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 P4HTMQ9NXG6 502 aa12.4□□□□□ -0.42
CNOT1-220ENST00000569916 BAHCC1Q9P281 2608 aa12.4□□□□□ -0.43
CNOT1-220ENST00000569916 CTAGE15A4D2H0 777 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 LCMT2O60294 686 aaKnown RBP12.39□□□□□ -0.43
CNOT1-220ENST00000569916 ANXA5P08758 320 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 CTAGE8P0CG41 777 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 CCDC166P0CW27 439 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 STMN1P16949 149 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 SPRP35270 261 aaPredicted RBP12.39□□□□□ -0.43
CNOT1-220ENST00000569916 RAB10P61026 200 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 MEF2AQ02078 507 aaPredicted RBP12.39□□□□□ -0.43
CNOT1-220ENST00000569916 FAM53BQ14153 422 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 DCAF10Q5QP82 559 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 ATG14Q6ZNE5 492 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 ASB18Q6ZVZ8 466 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 FRA10AC1Q70Z53 315 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 CTAGE6Q86UF2 777 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 CTAGE4Q8IX94 777 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 SPATA6LQ8N4H0 392 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 FDCSPQ8NFU4 85 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 OR4K1Q8NGD4 311 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 STT3BQ8TCJ2 826 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 NEIL2Q969S2 332 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 NACC2Q96BF6 587 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 TM4SF19Q96DZ7 209 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 THAP11Q96EK4 314 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 MMABQ96EY8 250 aaPredicted RBP12.39□□□□□ -0.43
CNOT1-220ENST00000569916 EGFL8Q99944 293 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 SARGQ9BW04 601 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 NUDT9Q9BW91 350 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 FAM129AQ9BZQ8 928 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 DRC3Q9H069 523 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 SPNS1Q9H2V7 528 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 ZNF282Q9UDV7 671 aaPredicted RBP12.39□□□□□ -0.43
CNOT1-220ENST00000569916 ANAPC2Q9UJX6 822 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 CDC14AQ9UNH5 594 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 HS3ST3B1Q9Y662 390 aa12.39□□□□□ -0.43
CNOT1-220ENST00000569916 A0A0A6YYC8 382 aaPredicted RBP12.38□□□□□ -0.43
CNOT1-220ENST00000569916 I3L1I5 382 aaPredicted RBP12.38□□□□□ -0.43
CNOT1-220ENST00000569916 J3QKU1 62 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 AGPSO00116 658 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 MASP2O00187 686 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 PEX12O00623 359 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 SOCS6O14544 535 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 FFAR3O14843 346 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 GPR42O15529 346 aa12.38□□□□□ -0.43
CNOT1-220ENST00000569916 PRPF4O43172 522 aaKnown RBP eCLIP12.38□□□□□ -0.435e-14■■■■■ 28.4
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms